RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 CALCRP30988 508 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 DAP3P51398 398 aaKnown RBP8.43□□□□□ -1.06
RNF4-221ENST00000513643 CDH11P55287 796 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 UBE2NP61088 152 aaKnown RBP8.43□□□□□ -1.06
RNF4-221ENST00000513643 RPL27P61353 136 aaKnown RBP8.43□□□□□ -1.06
RNF4-221ENST00000513643 TUBA1BP68363 451 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 TUBA4AP68366 448 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 IL1RL1Q01638 556 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 TRIM25Q14258 630 aaKnown RBP8.43□□□□□ -1.06
RNF4-221ENST00000513643 MELKQ14680 651 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 ALG10Q5BKT4 473 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 LCN8Q6JVE9 175 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 PGM2L1Q6PCE3 622 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 SLC25A47Q6Q0C1 308 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 FOXL2NBQ6ZUU3 175 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 TUBA1AQ71U36 451 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 FAM122BQ7Z309 247 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 MDP1Q86V88 176 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 CYP4Z1Q86W10 505 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 SKA3Q8IX90 412 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 NUP37Q8NFH4 326 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 OR6N1Q8NGY5 312 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 TMEM171Q8WVE6 324 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 HDAC2Q92769 488 aaKnown RBP8.43□□□□□ -1.06
RNF4-221ENST00000513643 NSMCE2Q96MF7 247 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 ZNF347Q96SE7 839 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 GPX7Q96SL4 187 aaPredicted RBP8.43□□□□□ -1.06
RNF4-221ENST00000513643 CXorf56Q9H5V9 222 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 B3GAT2Q9NPZ5 323 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 TMEM38BQ9NVV0 291 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 ZNF346Q9UL40 294 aaKnown RBP8.43□□□□□ -1.06
RNF4-221ENST00000513643 SIGLEC7Q9Y286 467 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 ARFGEF3Q5TH69 2177 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 NAV3Q8IVL0 2385 aa8.43□□□□□ -1.06
RNF4-221ENST00000513643 SH3PXD2BA1X283 911 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 EFCAB9A8MZ26 197 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 ATP6V1G2-DDX39BF2Z307 99 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 hCG_2039718K7EN88 272 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 ARHGEF9O43307 516 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 SERPINI2O75830 405 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 SEC14L2O76054 403 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 DIRAS1O95057 198 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 HLA-HP01893 362 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 CELA3BP08861 270 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 MMP7P09237 267 aaPredicted RBP8.42□□□□□ -1.06
RNF4-221ENST00000513643 B4GALT1P15291 398 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 ITGA2P17301 1181 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 ATP6V1B2P21281 511 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 APOBEC3AP31941 199 aaPredicted RBP8.42□□□□□ -1.06
RNF4-221ENST00000513643 MRPS34P82930 218 aaKnown RBP8.42□□□□□ -1.06
RNF4-221ENST00000513643 ZBED5Q49AG3 693 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 Q5PR19 223 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 SLC22A25Q6T423 547 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 KLHL24Q6TFL4 600 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 ZNF730Q6ZMV8 503 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 ZNF813Q6ZN06 617 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 TRPM8Q7Z2W7 1104 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 HDDC2Q7Z4H3 204 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 ZER1Q7Z7L7 766 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 OAFQ86UD1 273 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 MEX3DQ86XN8 651 aaKnown RBP8.42□□□□□ -1.06
RNF4-221ENST00000513643 ZNF584Q8IVC4 421 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 SLC22A24Q8N4F4 322 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 ARIH2OSQ8N7S6 290 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 NOXO1Q8NFA2 376 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 IL17RDQ8NFM7 739 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 OR51A7Q8NH64 312 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 NABP1Q96AH0 204 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 SLC7A6OSQ96CW6 309 aaPredicted RBP8.42□□□□□ -1.06
RNF4-221ENST00000513643 TSPAN32Q96QS1 320 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 ALG12Q9BV10 488 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 MUC13Q9H3R2 512 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 NRIP3Q9NQ35 241 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 CBLN4Q9NTU7 201 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 STX18Q9P2W9 335 aaKnown RBP8.42□□□□□ -1.06
RNF4-221ENST00000513643 PRPF19Q9UMS4 504 aaKnown RBP8.42□□□□□ -1.06
RNF4-221ENST00000513643 MOKQ9UQ07 419 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 TMEM5Q9Y2B1 443 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 POFUT2Q9Y2G5 429 aa8.42□□□□□ -1.06
RNF4-221ENST00000513643 FAM32AQ9Y421 112 aaKnown RBP8.42□□□□□ -1.06
RNF4-221ENST00000513643 TRAV27A0A087WT01 109 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 IGHV2OR16-5A0A0B4J2B6 119 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 TMEM129A0AVI4 362 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 MCIDASD6RGH6 385 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 H7C417 338 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 AHCYL1O43865 530 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 GMNNO75496 209 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 PDE5AO76074 875 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 TXNDC12O95881 172 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 CRYAAP02489 173 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 SERPINA5P05154 406 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 CD14P08571 375 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 OR8G3PP0DMU2 310 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 GSSP48637 474 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 SMIM11AP58511 58 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 CTXN1P60606 82 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 EFNB3Q15768 340 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 ETFDHQ16134 617 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 GSG1Q2KHT4 349 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 MTX3Q5HYI7 312 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms