RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 ZIM3Q96PE6 472 aa11.18□□□□□ -0.62
POLR2J3-216ENST00000511773 DCLRE1CQ96SD1 692 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-216ENST00000511773 MMP27Q9H306 513 aa11.18□□□□□ -0.62
POLR2J3-216ENST00000511773 TNFRSF19Q9NS68 423 aa11.18□□□□□ -0.62
POLR2J3-216ENST00000511773 SLC6A13Q9NSD5 602 aa11.18□□□□□ -0.62
POLR2J3-216ENST00000511773 DCAF16Q9NXF7 216 aa11.18□□□□□ -0.62
POLR2J3-216ENST00000511773 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 PPIAL4CA0A0B4J2A2 164 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 M0QZ24 198 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 UBOX5O94941 541 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 BPGMP07738 259 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 SBK2P0C263 348 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 ZNF12P17014 697 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 LBPP18428 481 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 IL12AP29459 219 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 MOGQ16653 247 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 TBC1D28Q2M2D7 210 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 ALG10BQ5I7T1 473 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 TMEM53Q6P2H8 277 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 OR4K5Q8NGD3 323 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 OR1J1Q8NGS3 322 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 UBE2FQ969M7 185 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 PKNOX2Q96KN3 472 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 BCL2L14Q9BZR8 327 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 EGLN1Q9GZT9 426 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 NPHS2Q9NP85 383 aa11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 TESQ9UGI8 421 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-216ENST00000511773 A0A0G2JPF8 293 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 PLSCR5A0PG75 271 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 WDR91A4D1P6 747 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 TMEM247A6NEH6 219 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 ZSCAN5BA6NJL1 495 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 HNRNPCL2B2RXH8 293 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 HNRNPCL3B7ZW38 293 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 LRRN3E7EW58 273 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 C11orf98E9PRG8 122 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 RFXANKO14593 260 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 HNRNPCL1O60812 293 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 FARS2O95363 451 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 IGHV3-13P01766 116 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 BGLAPP02818 100 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 HNRNPCL4P0DMR1 293 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 CCNOP22674 350 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 MTNR1AP48039 350 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 MVDP53602 400 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 RAG2P55895 527 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 SLC3A1Q07837 685 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 SPRNQ5BIV9 151 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 FAM209AQ5JX71 171 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 C16orf87Q6PH81 154 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 WDR88Q6ZMY6 472 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 PARP8Q8N3A8 854 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 SCAIQ8N9R8 606 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 IPCEF1Q8WWN9 437 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 SLC41A3Q96GZ6 507 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 NUF2Q9BZD4 464 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 LRMDAQ9H2I8 198 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 C1orf198Q9H425 327 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 C12orf10Q9HB07 376 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 BEX1Q9HBH7 125 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 TCF7L2Q9NQB0 619 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 TMEM38BQ9NVV0 291 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 GLTPQ9NZD2 209 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 EGFL7Q9UHF1 273 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 IFT52Q9Y366 437 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 MMP24Q9Y5R2 645 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
POLR2J3-216ENST00000511773 IQCMA0A1B0GVH7 501 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 PLPP3O14495 311 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 TM9SF1O15321 606 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 ALX3O95076 343 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 SNAP29O95721 258 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 IGHV2-70P01814 119 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 ALDOCP09972 364 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 MYZAPP0CAP1 466 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 MPV17P39210 176 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 SLC36A2Q495M3 483 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 GTDC1Q4AE62 458 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 TMEM255AQ5JRV8 349 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 NHLRC1Q6VVB1 395 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 SLC16A14Q7RTX9 510 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 PXKQ7Z7A4 578 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 COMTD1Q86VU5 262 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 NUDCD3Q8IVD9 361 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 KLHL36Q8N4N3 616 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 RBM15BQ8NDT2 890 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 CPEB3Q8NE35 698 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 OR52E2Q8NGJ4 325 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 OR1J2Q8NGS2 313 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 TMEM54Q969K7 222 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 MAL2Q969L2 176 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 ZBTB18Q99592 522 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 EPYCQ99645 322 aa11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 MRPL39Q9NYK5 338 aaKnown RBP11.15□□□□□ -0.62
POLR2J3-216ENST00000511773 OR5V1Q9UGF6 321 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms