RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 TSSK6Q9BXA6 273 aa9.15□□□□□ -0.94
NR1I3-227ENST00000510951 GABARAPL1Q9H0R8 117 aa9.15□□□□□ -0.94
NR1I3-227ENST00000510951 HEATR1Q9H583 2144 aaKnown RBP9.15□□□□□ -0.94
NR1I3-227ENST00000510951 NRIP3Q9NQ35 241 aa9.15□□□□□ -0.94
NR1I3-227ENST00000510951 PAPOLBQ9NRJ5 636 aaKnown RBP9.15□□□□□ -0.94
NR1I3-227ENST00000510951 CRIM1Q9NZV1 1036 aa9.15□□□□□ -0.94
NR1I3-227ENST00000510951 STX18Q9P2W9 335 aaKnown RBP9.15□□□□□ -0.94
NR1I3-227ENST00000510951 REV1Q9UBZ9 1251 aa9.15□□□□□ -0.94
NR1I3-227ENST00000510951 IGKV1D-43A0A0B4J1Z2 117 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 BHLHE40O14503 412 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 QDPRP09417 244 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 OSMP13725 252 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 B4GALT1P15291 398 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 HIST1H1CP16403 213 aaKnown RBP9.14□□□□□ -0.95
NR1I3-227ENST00000510951 IGFBP5P24593 272 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 KIR2DL3P43628 341 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 ELF3P78545 371 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-227ENST00000510951 ARF1P84077 181 aaKnown RBP9.14□□□□□ -0.95
NR1I3-227ENST00000510951 DBPQ10586 325 aaPredicted RBP9.14□□□□□ -0.95
NR1I3-227ENST00000510951 HIKESHIQ53FT3 197 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 GPR139Q6DWJ6 353 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 LRFN4Q6PJG9 635 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 KLHL24Q6TFL4 600 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 CD300LDQ6UXZ3 194 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 C22orf34Q6ZV56 151 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 PTCHD4Q6ZW05 846 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 JAZF1Q86VZ6 243 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 WFDC8Q8IUA0 241 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 SDR9C7Q8NEX9 313 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 OR1K1Q8NGR3 316 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 OR4K13Q8NH42 304 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 OR52N5Q8NH56 324 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 MCHR2Q969V1 340 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 LRR1Q96L50 414 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 FOXN4Q96NZ1 517 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 WFIKKN1Q96NZ8 548 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 ALG12Q9BV10 488 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 MRPL13Q9BYD1 178 aaKnown RBP9.14□□□□□ -0.95
NR1I3-227ENST00000510951 SYT4Q9H2B2 425 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 FN3KQ9H479 309 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 RERGLQ9H628 205 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 KRT84Q9NSB2 600 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 IL20Q9NYY1 176 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 POFUT2Q9Y2G5 429 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 GPR52Q9Y2T5 361 aa9.14□□□□□ -0.95
NR1I3-227ENST00000510951 A0A1W2PPL8 197 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 SLC22A23A1A5C7 686 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 PRSS37A4D1T9 235 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 ZNF99A8MXY4 864 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-227ENST00000510951 H0YHG0 523 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 RPL36A-HNRNPH2H7BZ11 118 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 EI24O14681 340 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 DHHO43323 396 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 TXNDC12O95881 172 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 ANPEPP15144 967 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 HOXC12P31275 282 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 CDAP32320 146 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 CDKN2AP42771 156 aaKnown RBP9.13□□□□□ -0.95
NR1I3-227ENST00000510951 CAPZA2P47755 286 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 SH3BGRP55822 239 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-227ENST00000510951 TUBA1BP68363 451 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 TUBA4AP68366 448 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 TGFBR3Q03167 851 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.13□□□□□ -0.95
NR1I3-227ENST00000510951 COX10Q12887 443 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 TAB1Q15750 504 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 GABRA6Q16445 453 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 HIST3H3Q16695 136 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 PGGHGQ32M88 737 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 TBRG1Q3YBR2 411 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 ZNF787Q6DD87 383 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 LEG1Q6P5S2 330 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 ZNF813Q6ZN06 617 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 TUBA1AQ71U36 451 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 ADCK1Q86TW2 530 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 CBR4Q8N4T8 237 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 CYB561A3Q8NBI2 242 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 C1orf162Q8NEQ5 155 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-227ENST00000510951 OR2T33Q8NG76 320 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 OR52E2Q8NGJ4 325 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 DNAJC9Q8WXX5 260 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 NMNAT3Q96T66 252 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 FOXB1Q99853 325 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 HDHD5Q9BXW7 423 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 NELFAQ9H3P2 528 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 NDRG3Q9UGV2 375 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 TMEFF2Q9UIK5 374 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-227ENST00000510951 HECTD1Q9ULT8 2610 aa9.13□□□□□ -0.95
NR1I3-227ENST00000510951 CADP27708 2225 aa9.12□□□□□ -0.95
NR1I3-227ENST00000510951 OR5H1A6NKK0 313 aa9.12□□□□□ -0.95
NR1I3-227ENST00000510951 CENPBD1B2RD01 187 aa9.12□□□□□ -0.95
NR1I3-227ENST00000510951 ARPC3O15145 178 aa9.12□□□□□ -0.95
NR1I3-227ENST00000510951 RENP00797 406 aa9.12□□□□□ -0.95
NR1I3-227ENST00000510951 THBDP07204 575 aa9.12□□□□□ -0.95
NR1I3-227ENST00000510951 NR2C1P13056 603 aa9.12□□□□□ -0.95
NR1I3-227ENST00000510951 APEHP13798 732 aaKnown RBP9.12□□□□□ -0.95
NR1I3-227ENST00000510951 PPP3CBP16298 524 aa9.12□□□□□ -0.95
NR1I3-227ENST00000510951 CTLA4P16410 223 aa9.12□□□□□ -0.95
NR1I3-227ENST00000510951 PEX19P40855 299 aa9.12□□□□□ -0.95
NR1I3-227ENST00000510951 PCYT1AP49585 367 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms