RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 CCDC197Q8NCU1 140 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 NFAM1Q8NET5 270 aaPredicted RBP3.08□□□□□ -1.92
NUP54-209ENST00000510569 OR51L1Q8NGJ5 315 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 MARCH1Q8TCQ1 289 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 HTR3CQ8WXA8 447 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 ADIPOR1Q96A54 375 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 CCDC127Q96BQ5 260 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 ECHDC3Q96DC8 303 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 GPR137Q96N19 417 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 RIT2Q99578 217 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 ZNF184Q99676 751 aaPredicted RBP3.08□□□□□ -1.92
NUP54-209ENST00000510569 NAT9Q9BTE0 207 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 SLC38A10Q9HBR0 1119 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 MRPL40Q9NQ50 206 aaKnown RBP3.08□□□□□ -1.92
NUP54-209ENST00000510569 SEC14L4Q9UDX3 406 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 RBMX2Q9Y388 322 aaKnown RBP3.08□□□□□ -1.92
NUP54-209ENST00000510569 USP16Q9Y5T5 823 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 NPTNQ9Y639 398 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 MAP3K5Q99683 1374 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 ADAMTS7Q9UKP4 1686 aa3.08□□□□□ -1.92
NUP54-209ENST00000510569 PPIAL4EA0A075B759 164 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 IGKV6-21A0A0C4DH24 114 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 LOC105371267A0A1B0GV96 52 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 SMCO3A2RU48 225 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CLDN5O00501 218 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CHEK1O14757 476 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 EIF3HO15372 352 aaKnown RBP eCLIP3.07□□□□□ -1.92
NUP54-209ENST00000510569 SYT7O43581 403 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 OR1F1O43749 312 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 TOM1O60784 492 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 GMNNO75496 209 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ANXA9O76027 345 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 TM7SF2O76062 418 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 TSPAN12O95859 305 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 GOT2P00505 430 aaKnown RBP3.07□□□□□ -1.92
NUP54-209ENST00000510569 CST1P01037 141 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 STSP08842 583 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 OCMP0CE72 109 aaPredicted RBP3.07□□□□□ -1.92
NUP54-209ENST00000510569 PPIAL4FP0DN26 164 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CTRB1P17538 263 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 FCARP24071 287 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 KIR3DL2P43630 455 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CSNK1DP48730 415 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CDC34P49427 236 aaPredicted RBP3.07□□□□□ -1.92
NUP54-209ENST00000510569 P2RY4P51582 365 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CCL11P51671 97 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CLDN18P56856 261 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 UBE2G2P60604 165 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 IRF8Q02556 426 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 PMS2P3Q13401 168 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ASAH1Q13510 395 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 SPCS2Q15005 226 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 STX1AQ16623 288 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 AGKQ53H12 422 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CMPK2Q5EBM0 449 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ACER2Q5QJU3 275 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 C6orf183Q5T699 404 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 OTPQ5XKR4 325 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CTRB2Q6GPI1 263 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 H3F3CQ6NXT2 135 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 PLEKHG7Q6ZR37 379 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ABHD12BQ7Z5M8 362 aaPredicted RBP3.07□□□□□ -1.92
NUP54-209ENST00000510569 TGIF2LXQ8IUE1 241 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 IQCKQ8N0W5 287 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 C14orf178Q8N769 122 aaPredicted RBP3.07□□□□□ -1.92
NUP54-209ENST00000510569 CCNYL1Q8N7R7 359 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 MLKLQ8NB16 471 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 COLGALT1Q8NBJ5 622 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 OR4A15Q8NGL6 344 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ST8SIA1Q92185 356 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 GTF2H4Q92759 462 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 MCHR2Q969V1 340 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ASB9Q96DX5 294 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 TM4SF19Q96DZ7 209 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CERS2Q96G23 380 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 DUS3LQ96G46 650 aaKnown RBP3.07□□□□□ -1.92
NUP54-209ENST00000510569 GLT1D1Q96MS3 346 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 GUCD1Q96NT3 240 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CGREF1Q99674 301 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CTRCQ99895 268 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 TMEM246Q9BRR3 403 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 WRAP53Q9BUR4 548 aaKnown RBP3.07□□□□□ -1.92
NUP54-209ENST00000510569 HINT2Q9BX68 163 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 TEKT3Q9BXF9 490 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 PARD6GQ9BYG4 376 aaPredicted RBP3.07□□□□□ -1.92
NUP54-209ENST00000510569 LRRC2Q9BYS8 371 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ROGDIQ9GZN7 287 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ELOVL3Q9HB03 270 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 MCCC2Q9HCC0 563 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 RRAGDQ9NQL2 400 aaPredicted RBP3.07□□□□□ -1.92
NUP54-209ENST00000510569 ACOXLQ9NUZ1 547 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ADA2Q9NZK5 511 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 PIPOXQ9P0Z9 390 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 PRODH2Q9UF12 536 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CLEC2DQ9UHP7 191 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 LCMT1Q9UIC8 334 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 RAB23Q9ULC3 237 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 FLVCR2Q9UPI3 526 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 POFUT2Q9Y2G5 429 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 PPIAL4AQ9Y536 164 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms