RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 C10orf53Q8N6V4 93 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 CPEB3Q8NE35 698 aaKnown RBP13.55□□□□□ -0.24
RAB40C-202ENST00000509637 BHLHE22Q8NFJ8 381 aaPredicted RBP13.55□□□□□ -0.24
RAB40C-202ENST00000509637 ZFAND2BQ8WV99 257 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 SPDL1Q96EA4 605 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 PRSS27Q9BQR3 290 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 ZNF665Q9H7R5 613 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 B3GAT2Q9NPZ5 323 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 CCDC167Q9P0B6 97 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 ERLIN1O75477 346 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 RAB36O95755 333 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 MMP7P09237 267 aaPredicted RBP13.54□□□□□ -0.24
RAB40C-202ENST00000509637 CD247P20963 164 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 EPHA1P21709 976 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 MYBPC1Q00872 1141 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 HIST3H3Q16695 136 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 TUSC1Q2TAM9 212 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 RUNDC3AQ59EK9 446 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 RGS7BPQ6MZT1 257 aaPredicted RBP13.54□□□□□ -0.24
RAB40C-202ENST00000509637 UGT2A3Q6UWM9 527 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 SLC30A7Q8NEW0 376 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 OR4K5Q8NGD3 323 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 OR51F2Q8NH61 342 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 FAM216AQ8WUB2 273 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 ZNF347Q96SE7 839 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 EPYCQ99645 322 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 RAD21L1Q9H4I0 556 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 DENND2DQ9H6A0 471 aaPredicted RBP13.54□□□□□ -0.24
RAB40C-202ENST00000509637 ZNF385DQ9H6B1 395 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 CACYBPQ9HB71 228 aaKnown RBP13.54□□□□□ -0.24
RAB40C-202ENST00000509637 MEPEQ9NQ76 525 aaPredicted RBP13.54□□□□□ -0.24
RAB40C-202ENST00000509637 TCF7L2Q9NQB0 619 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 HINT3Q9NQE9 182 aaKnown RBP13.54□□□□□ -0.24
RAB40C-202ENST00000509637 DCAF16Q9NXF7 216 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 SLC7A8Q9UHI5 535 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 PCDHB10Q9UN67 800 aa13.54□□□□□ -0.24
RAB40C-202ENST00000509637 TRAV20A0A0B4J274 112 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 A0A1W2PPW3 197 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 CPSF4LA6NMK7 179 aaKnown RBP13.53□□□□□ -0.24
RAB40C-202ENST00000509637 M0QX08 132 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 MPZL1O95297 269 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 FSHBP01225 129 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 QDPRP09417 244 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 ASAH2BP0C7U1 165 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 OR8G3PP0DMU2 310 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 MAKP20794 623 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 FUT4P22083 530 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 MPV17P39210 176 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 WNT5AP41221 380 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 CRYBB2P43320 205 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 GALK2Q01415 458 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 GLO1Q04760 184 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 ENTPD8Q5MY95 495 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 RETREG3Q86VR2 466 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 ARMC8Q8IUR7 673 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 NMD3Q96D46 503 aaKnown RBP13.53□□□□□ -0.24
RAB40C-202ENST00000509637 SLC6A7Q99884 636 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 ZNF426Q9BUY5 554 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 C1QTNF5Q9BXJ0 243 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 MRPL13Q9BYD1 178 aaKnown RBP13.53□□□□□ -0.24
RAB40C-202ENST00000509637 TMBIM4Q9HC24 238 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 GRIP1Q9Y3R0 1128 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 WIPI2Q9Y4P8 454 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 UGT2A1Q9Y4X1 527 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 MGAM2Q2M2H8 2515 aa13.53□□□□□ -0.24
RAB40C-202ENST00000509637 CHP2O43745 196 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 MGRN1O60291 552 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 PNPP00491 289 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 MT-ATP6P00846 226 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 IGHV2-5P01817 119 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 UCP2P55851 309 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF613Q6PF04 617 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 USP51Q70EK9 711 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 USP43Q70EL4 1123 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF771Q7L3S4 317 aaPredicted RBP13.52□□□□□ -0.25
RAB40C-202ENST00000509637 KRT73Q86Y46 540 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 ZNF101Q8IZC7 436 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 HIPK4Q8NE63 616 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 SYNPRQ8TBG9 265 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 C22orf15Q8WYQ4 148 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 MCHR2Q969V1 340 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 TAMM41Q96BW9 452 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 SLC25A44Q96H78 314 aaPredicted RBP13.52□□□□□ -0.25
RAB40C-202ENST00000509637 SEPHS2Q99611 448 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 SPATA5L1Q9BVQ7 753 aa13.52□□□□□ -0.25
RAB40C-202ENST00000509637 LOC100509620A0A075B734 347 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 KPNA4O00629 521 aaPredicted RBP13.51□□□□□ -0.25
RAB40C-202ENST00000509637 PCMT1P22061 227 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 SLC6A2P23975 617 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 ZFP36P26651 326 aaKnown RBP13.51□□□□□ -0.25
RAB40C-202ENST00000509637 CDAP32320 146 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 GZMMP51124 257 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 RPS23P62266 143 aaKnown RBP13.51□□□□□ -0.25
RAB40C-202ENST00000509637 ACTG1P63261 375 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 RBBP4Q09028 425 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 TSTQ16762 297 aaKnown RBP13.51□□□□□ -0.25
RAB40C-202ENST00000509637 NKPD1Q17RQ9 610 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 AGKQ53H12 422 aa13.51□□□□□ -0.25
RAB40C-202ENST00000509637 SWT1Q5T5J6 900 aaKnown RBP13.51□□□□□ -0.25
RAB40C-202ENST00000509637 ACSM5Q6NUN0 579 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms