RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 FLNAP21333 2647 aaKnown RBP17.28■□□□□ 0.36
SFXN1-209ENST00000508290 A6NIZ1 184 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 QDPRP09417 244 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 INHBBP09529 407 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 CALB2P22676 271 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 IDH3GP51553 393 aaPredicted RBP17.28■□□□□ 0.36
SFXN1-209ENST00000508290 RAP1BP61224 184 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 RAP1AP62834 184 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 TUBA1BP68363 451 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 TUBA4AP68366 448 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 MTX3Q5HYI7 312 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 C10orf128Q5T292 105 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 LRFN4Q6PJG9 635 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 TUBA1AQ71U36 451 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 SLC22A24Q8N4F4 322 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 MOSPD2Q8NHP6 518 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 SLC7A13Q8TCU3 470 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 NSL1Q96IY1 281 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 COX4I2Q96KJ9 171 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 C7orf34Q96L11 122 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 C1orf198Q9H425 327 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 TMEM38BQ9NVV0 291 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 SPEF1Q9Y4P9 236 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 CADP27708 2225 aa17.28■□□□□ 0.36
SFXN1-209ENST00000508290 ARPC2O15144 300 aa17.27■□□□□ 0.36
SFXN1-209ENST00000508290 PIP5K1CO60331 668 aa17.27■□□□□ 0.36
SFXN1-209ENST00000508290 TRMUO75648 421 aaKnown RBP17.27■□□□□ 0.36
SFXN1-209ENST00000508290 SEC14L2O76054 403 aa17.27■□□□□ 0.36
SFXN1-209ENST00000508290 HLA-HP01893 362 aa17.27■□□□□ 0.36
SFXN1-209ENST00000508290 CD79AP11912 226 aa17.27■□□□□ 0.36
SFXN1-209ENST00000508290 TCN1P20061 433 aaPredicted RBP17.27■□□□□ 0.36
SFXN1-209ENST00000508290 CDKN1AP38936 164 aa17.27■□□□□ 0.36
SFXN1-209ENST00000508290 RPL27P61353 136 aaKnown RBP17.27■□□□□ 0.36
SFXN1-209ENST00000508290 MCHR2Q969V1 340 aa17.27■□□□□ 0.36
SFXN1-209ENST00000508290 DHRS1Q96LJ7 313 aa17.27■□□□□ 0.36
SFXN1-209ENST00000508290 CACNG6Q9BXT2 260 aa17.27■□□□□ 0.36
SFXN1-209ENST00000508290 ARID1AO14497 2285 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 B9A039 149 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 AHCYL1O43865 530 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 PTHP01270 115 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 NPR2P20594 1047 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 MAKP20794 623 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 SERPINF1P36955 418 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 DSCR9P59020 149 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 SNRPD2P62316 118 aaKnown RBP17.26■□□□□ 0.35
SFXN1-209ENST00000508290 RAB1AP62820 205 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 NPRL3Q12980 569 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 LAPTM4AQ15012 233 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 RAB35Q15286 201 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 EFNB3Q15768 340 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 SLC36A2Q495M3 483 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 FGD3Q5JSP0 725 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 THEM4Q5T1C6 240 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 TSEN54Q7Z6J9 526 aaKnown RBP17.26■□□□□ 0.35
SFXN1-209ENST00000508290 WDFY1Q8IWB7 410 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 RBP7Q96R05 134 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 ZNF347Q96SE7 839 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 FAM53CQ9NYF3 392 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 ACTR3BQ9P1U1 418 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 MED13LQ71F56 2210 aa17.26■□□□□ 0.35
SFXN1-209ENST00000508290 MTORP42345 2549 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 IGHV2OR16-5A0A0B4J2B6 119 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 B2RBV5 119 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 SEMG1P04279 462 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 ZNF14P17017 642 aaPredicted RBP17.25■□□□□ 0.35
SFXN1-209ENST00000508290 CTXN1P60606 82 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 MRPS34P82930 218 aaKnown RBP17.25■□□□□ 0.35
SFXN1-209ENST00000508290 VLDLRP98155 873 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 CLEC12BQ2HXU8 276 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 ZBED5Q49AG3 693 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 TMEM53Q6P2H8 277 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 PODNL1Q6PEZ8 512 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 RBM15BQ8NDT2 890 aaKnown RBP17.25■□□□□ 0.35
SFXN1-209ENST00000508290 OR51A7Q8NH64 312 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 KCNK17Q96T54 332 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 KCNN2Q9H2S1 579 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 ADAM21Q9UKJ8 722 aa17.25■□□□□ 0.35
SFXN1-209ENST00000508290 PRPF19Q9UMS4 504 aaKnown RBP17.25■□□□□ 0.35
SFXN1-209ENST00000508290 ZNF503-AS2A6NEH8 195 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 IGHV4-39P01824 125 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 SERPINA5P05154 406 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 FABP3P05413 133 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 IFNGR2P38484 337 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 GUCA1AP43080 201 aaPredicted RBP17.24■□□□□ 0.35
SFXN1-209ENST00000508290 GIPRP48546 466 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 PTDSS1P48651 473 aaKnown RBP17.24■□□□□ 0.35
SFXN1-209ENST00000508290 RPS23P62266 143 aaKnown RBP17.24■□□□□ 0.35
SFXN1-209ENST00000508290 CD47Q08722 323 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 SWI5Q1ZZU3 235 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 SLC16A14Q7RTX9 510 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 SKA3Q8IX90 412 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 LRRC75AQ8NAA5 344 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 SYT14Q8NB59 555 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 OR13C2Q8NGS9 318 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 TNFRSF13CQ96RJ3 184 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 C1orf21Q9H246 121 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 SIAEQ9HAT2 523 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 IL1RAPQ9NPH3 570 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 ZNF224Q9NZL3 707 aa17.24■□□□□ 0.35
SFXN1-209ENST00000508290 TRAV27A0A087WT01 109 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms