RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 CLIC1O00299 241 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 RGS16O15492 202 aaPredicted RBP15.3■□□□□ 0.04
CLDND1-217ENST00000508071 OR6A2O95222 327 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 ADORA3P0DMS8 318 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 BMP2P12643 396 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 CCL2P13500 99 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 DRD4P21917 467 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 ERVS71-1P61550 626 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 VSNL1P62760 191 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 DEFA6Q01524 100 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 OR1Q1Q15612 314 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 TSTQ16762 297 aaKnown RBP15.3■□□□□ 0.04
CLDND1-217ENST00000508071 TBC1D28Q2M2D7 210 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 KRT71Q3SY84 523 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 DHRS4L2Q6PKH6 230 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 COMTD1Q86VU5 262 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 KRT73Q86Y46 540 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 OR1J2Q8NGS2 313 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 TMEM54Q969K7 222 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 SH3GL3Q99963 347 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 GAL3ST1Q99999 423 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 PAIP2Q9BPZ3 127 aaKnown RBP15.3■□□□□ 0.04
CLDND1-217ENST00000508071 SPATA5L1Q9BVQ7 753 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 BCL2L14Q9BZR8 327 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 OPN4Q9UHM6 478 aa15.3■□□□□ 0.04
CLDND1-217ENST00000508071 A0A0B4J2E0 115 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 A0A1B0GX12 115 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 FSHBP01225 129 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 PTHP01270 115 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 POLR2JP52435 117 aaKnown RBP15.29■□□□□ 0.04
CLDND1-217ENST00000508071 UCP2P55851 309 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 RGS8P57771 180 aaPredicted RBP15.29■□□□□ 0.04
CLDND1-217ENST00000508071 WDR88Q6ZMY6 472 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 ZNF771Q7L3S4 317 aaPredicted RBP15.29■□□□□ 0.04
CLDND1-217ENST00000508071 DPPA2Q7Z7J5 298 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 OR5J2Q8NH18 312 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 OR6X1Q8NH79 312 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 NFKBIDQ8NI38 313 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 ELMOD3Q96FG2 381 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 TMEM43Q9BTV4 400 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 RSPO3Q9BXY4 272 aaPredicted RBP15.29■□□□□ 0.04
CLDND1-217ENST00000508071 LRMDAQ9H2I8 198 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 KCNK9Q9NPC2 374 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 TMEM38BQ9NVV0 291 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 SLC13A4Q9UKG4 626 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 CACNG2Q9Y698 323 aa15.29■□□□□ 0.04
CLDND1-217ENST00000508071 TPST1O60507 370 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 SNAP29O95721 258 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 MT-ATP6P00846 226 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 KITP10721 976 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 LCN2P80188 198 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 GLO1Q04760 184 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 SLC36A2Q495M3 483 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 GCNT6Q5T4J0 391 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 TREML4Q6UXN2 200 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 SLC35D2Q76EJ3 337 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 SIGLECL1Q8N7X8 197 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 GTF3AQ92664 365 aaKnown RBP15.28■□□□□ 0.04
CLDND1-217ENST00000508071 DVL3Q92997 716 aaPredicted RBP15.28■□□□□ 0.04
CLDND1-217ENST00000508071 ZNF566Q969W8 418 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 PAIP1Q9H074 479 aaKnown RBP15.28■□□□□ 0.04
CLDND1-217ENST00000508071 TCF7L2Q9NQB0 619 aa15.28■□□□□ 0.04
CLDND1-217ENST00000508071 IQCMA0A1B0GVH7 501 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 ISPDA4D126 451 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 PRORSD1PA6NEY8 169 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 DHHO43323 396 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 ARAFP10398 606 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 ZNF81P51508 661 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 CDH12P55289 794 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 PLP2Q04941 152 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 MPP2Q14168 576 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 CEP85LQ5SZL2 805 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 SWT1Q5T5J6 900 aaKnown RBP15.27■□□□□ 0.04
CLDND1-217ENST00000508071 HHATQ5VTY9 493 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 REEP3Q6NUK4 255 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 LRFN4Q6PJG9 635 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 SLC16A14Q7RTX9 510 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 RANBP3LQ86VV4 465 aaPredicted RBP15.27■□□□□ 0.04
CLDND1-217ENST00000508071 GOLGA6L1Q8N7Z2 621 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 OR4K5Q8NGD3 323 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 OR9I1Q8NGQ6 314 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 ST7LQ8TDW4 575 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 AENQ8WTP8 325 aaKnown RBP15.27■□□□□ 0.04
CLDND1-217ENST00000508071 CCL17Q92583 94 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 GTF2H4Q92759 462 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 ZMAT3Q9HA38 289 aaKnown RBP15.27■□□□□ 0.04
CLDND1-217ENST00000508071 SDR39U1Q9NRG7 319 aaPredicted RBP15.27■□□□□ 0.04
CLDND1-217ENST00000508071 UBAP1Q9NZ09 502 aa15.27■□□□□ 0.04
CLDND1-217ENST00000508071 RNF13O43567 381 aa15.26■□□□□ 0.03
CLDND1-217ENST00000508071 ZNF500O60304 480 aaPredicted RBP15.26■□□□□ 0.03
CLDND1-217ENST00000508071 IGHV3-13P01766 116 aa15.26■□□□□ 0.03
CLDND1-217ENST00000508071 MAKP20794 623 aa15.26■□□□□ 0.03
CLDND1-217ENST00000508071 PRTN3P24158 256 aa15.26■□□□□ 0.03
CLDND1-217ENST00000508071 CDK6Q00534 326 aa15.26■□□□□ 0.03
CLDND1-217ENST00000508071 SLC3A1Q07837 685 aa15.26■□□□□ 0.03
CLDND1-217ENST00000508071 ARMCX4Q5H9R4 360 aa15.26■□□□□ 0.03
CLDND1-217ENST00000508071 FAM209AQ5JX71 171 aa15.26■□□□□ 0.03
CLDND1-217ENST00000508071 SLC2A7Q6PXP3 512 aa15.26■□□□□ 0.03
CLDND1-217ENST00000508071 RBM15BQ8NDT2 890 aaKnown RBP15.26■□□□□ 0.03
CLDND1-217ENST00000508071 CPEB3Q8NE35 698 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms