RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 DNAJC19Q96DA6 116 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 ASB9Q96DX5 294 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 LINC00167Q96N53 147 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 GABARAPL3Q9BY60 117 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 SLC25A39Q9BZJ4 359 aaPredicted RBP2.18□□□□□ -2.06
LSM6-205ENST00000507449 RACGAP1Q9H0H5 632 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 DCAF16Q9NXF7 216 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 ZNF226Q9NYT6 803 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 STOX2Q9P2F5 926 aaPredicted RBP2.18□□□□□ -2.06
LSM6-205ENST00000507449 GTF3C1Q12789 2109 aa2.18□□□□□ -2.06
LSM6-205ENST00000507449 WDR62O43379 1518 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 C11orf94C9JXX5 98 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 LAD1O00515 517 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 DLGAP1O14490 977 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 PPP1R2P9O14990 202 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 SOX15O60248 233 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 ERLIN1O75477 346 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 CLPXO76031 633 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 UTS2O95399 124 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 C6orf47O95873 294 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 BGLAPP02818 100 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 HPGDP15428 266 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 AQP2P41181 271 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 CCNHP51946 323 aaPredicted RBP2.17□□□□□ -2.06
LSM6-205ENST00000507449 ZNF136P52737 540 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 ACLYP53396 1101 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 CDH6P55285 790 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 TMEM183BQ1AE95 376 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 VPS26BQ4G0F5 336 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 LY6G6FQ5SQ64 297 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 ARMC12Q5T9G4 340 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 LRRC66Q68CR7 880 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 C6orf120Q7Z4R8 191 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 MMAAQ8IVH4 418 aaKnown RBP2.17□□□□□ -2.06
LSM6-205ENST00000507449 TMEM183AQ8IXX5 376 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 GTPBP8Q8N3Z3 284 aaPredicted RBP2.17□□□□□ -2.06
LSM6-205ENST00000507449 Q8N9L7 120 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 MARCH1Q8TCQ1 289 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 ACTRT1Q8TDG2 376 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 DUS3LQ96G46 650 aaKnown RBP2.17□□□□□ -2.06
LSM6-205ENST00000507449 FAM210BQ96KR6 192 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 WFIKKN1Q96NZ8 548 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 ATP5SQ99766 215 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 OR51M1Q9H341 326 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 FGF20Q9NP95 211 aaPredicted RBP2.17□□□□□ -2.06
LSM6-205ENST00000507449 PCYOX1Q9UHG3 505 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 NUP50Q9UKX7 468 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 NFASCO94856 1347 aa2.17□□□□□ -2.06
LSM6-205ENST00000507449 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.16□□□□□ -2.06
LSM6-205ENST00000507449 A0A096LNJ9 63 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 HIDE1A8MVS5 230 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 F6UB75 175 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 H3BNH8 94 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 RAB29O14966 203 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 MRPS12O15235 138 aaKnown RBP2.16□□□□□ -2.06
LSM6-205ENST00000507449 RNF13O43567 381 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 SLC25A27O95847 323 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 HOXC4P09017 264 aaPredicted RBP2.16□□□□□ -2.06
LSM6-205ENST00000507449 TNNI1P19237 187 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 HOXA9P31269 272 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 SERPINB5P36952 375 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 UGT2B15P54855 530 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 UCNP55089 124 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 TGM3Q08188 693 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 PON3Q15166 354 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 CHRNA6Q15825 494 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 MRPL23Q16540 153 aaKnown RBP2.16□□□□□ -2.06
LSM6-205ENST00000507449 ALKBH6Q3KRA9 238 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 TTLL9Q3SXZ7 439 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 ZBED5Q49AG3 693 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 HSP90AB3PQ58FF7 597 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 AGBL2Q5U5Z8 902 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 SLC8B1Q6J4K2 584 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 TMEM135Q86UB9 458 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 ENTHD1Q8IYW4 607 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 SPATA4Q8NEY3 305 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 OR10R2Q8NGX6 335 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 GPR151Q8TDV0 419 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 ACMSDQ8TDX5 336 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 GEMIN6Q8WXD5 167 aaKnown RBP2.16□□□□□ -2.06
LSM6-205ENST00000507449 PIBF1Q8WXW3 757 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 SLC29A1Q99808 456 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 OSBPL10Q9BXB5 764 aa2.16□□□□□ -2.06
LSM6-205ENST00000507449 ILKAPQ9H0C8 392 aaPredicted RBP2.16□□□□□ -2.06
LSM6-205ENST00000507449 RPF2Q9H7B2 306 aaKnown RBP2.16□□□□□ -2.06
LSM6-205ENST00000507449 NSD2O96028 1365 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 A0A1W2PNU3 283 aaPredicted RBP2.15□□□□□ -2.07
LSM6-205ENST00000507449 PRSS37A4D1T9 235 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 CTAGE15A4D2H0 777 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 DNALI1O14645 258 aaPredicted RBP2.15□□□□□ -2.07
LSM6-205ENST00000507449 CLIC3O95833 236 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 ANXA5P08758 320 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 PNMA6AP0CW24 399 aaPredicted RBP2.15□□□□□ -2.07
LSM6-205ENST00000507449 SMIM10L1P0DMW3 83 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 HRH1P35367 487 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 TMED10P49755 219 aaKnown RBP2.15□□□□□ -2.07
LSM6-205ENST00000507449 ACTA2P62736 377 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 ACTG2P63267 376 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 ACTC1P68032 377 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 ACTA1P68133 377 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms