RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TAF11Q15544 211 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 MOGQ16653 247 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 KRT80Q6KB66 452 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 UNQ6126/PRO20091Q6UXV3 157 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 ARPINQ7Z6K5 226 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 CARM1Q86X55 608 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 CALHM3Q86XJ0 350 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 LIPHQ8WWY8 451 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 LZICQ8WZA0 190 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 ZNF75AQ96N20 296 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 KCNN2Q9H2S1 579 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 REV1Q9UBZ9 1251 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 SH3GLB1Q9Y371 365 aa12.45□□□□□ -0.42
HMGCS1-203ENST00000507004 IGHV4-61A0A0C4DH41 118 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 FBP2O00757 339 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 MRASO14807 208 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 PGA4P0DJD7 388 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 PGA3P0DJD8 388 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 SRD5A1P18405 259 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 FUT1P19526 365 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 CLRN1P58418 232 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 PIGFQ07326 219 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 FXNQ16595 210 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 ANKDD1AQ495B1 522 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 WDR88Q6ZMY6 472 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 MYPOPQ86VE0 399 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 LSRQ86X29 649 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 RBM45Q8IUH3 476 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 C1orf174Q8IYL3 243 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 OR4D11Q8NGI4 311 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 SGTBQ96EQ0 304 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 PRSS27Q9BQR3 290 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 SMURF2Q9HAU4 748 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 INIPQ9NRY2 104 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 MED31Q9Y3C7 131 aa12.44□□□□□ -0.42
HMGCS1-203ENST00000507004 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.427e-9■■□□□ 11.9
HMGCS1-203ENST00000507004 IQCMA0A1B0GVH7 501 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 FAM220BPB1ANY3 271 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 BLOC1S5-TXNDC5H3BN57 136 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 KPNA4O00629 521 aaPredicted RBP12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 NDUFAB1O14561 156 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 OR7A10O76100 309 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 SNAP29O95721 258 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 THY1P04216 161 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 ADRA2AP08913 450 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 QDPRP09417 244 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 RAD52P43351 418 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 ZNF133P52736 654 aaPredicted RBP12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 ST3GAL3Q11203 375 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 KLF10Q13118 480 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 HIST3H3Q16695 136 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 TBC1D28Q2M2D7 210 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 RGS7BPQ6MZT1 257 aaPredicted RBP12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 SLC16A14Q7RTX9 510 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 SKA3Q8IX90 412 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 TMEM239Q8WW34 195 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 MSI2Q96DH6 328 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 MS4A3Q96HJ5 214 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 SEPHS2Q99611 448 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 MRPL37Q9BZE1 423 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 BCL2L14Q9BZR8 327 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 RNF121Q9H920 327 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 CHODLQ9H9P2 273 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 CDH20Q9HBT6 801 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 SAR1AQ9NR31 198 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 SLCO1C1Q9NYB5 712 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 ZNF224Q9NZL3 707 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 RIMS3Q9UJD0 308 aa12.43□□□□□ -0.42
HMGCS1-203ENST00000507004 SH3PXD2BA1X283 911 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 FXYD1O00168 92 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 TGFAP01135 160 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 MT-ND5P03915 603 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 ACADSP16219 412 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 ACHEP22303 614 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 KDELR2P33947 212 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 TMEM33P57088 247 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 RPL18Q07020 188 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 RIN1Q13671 783 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 RAB39AQ14964 217 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 RABL3Q5HYI8 236 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 FAM209AQ5JX71 171 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 C10orf128Q5T292 105 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 FAM205BPQ63HN1 556 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 LRFN4Q6PJG9 635 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 DEF8Q6ZN54 512 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 CDK20Q8IZL9 346 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 LINC01356Q8N9X3 169 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 SLC30A7Q8NEW0 376 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 NOXO1Q8NFA2 376 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 OR2T12Q8NG77 320 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 SNX33Q8WV41 574 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 C10orf82Q8WW14 230 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 RDH5Q92781 318 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 MCHR2Q969V1 340 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 ZNF583Q96ND8 569 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 ZNF416Q9BWM5 594 aa12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 MRPL13Q9BYD1 178 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 MEPEQ9NQ76 525 aaPredicted RBP12.42□□□□□ -0.42
HMGCS1-203ENST00000507004 CAPN7Q9Y6W3 813 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms