RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SEH1LQ96EE3 360 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 MNTQ99583 582 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 RNF122Q9H9V4 155 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 ACKR4Q9NPB9 350 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 SLC17A5Q9NRA2 495 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 FAM171A2A8MVW0 826 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 F8VVB4 439 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 F8VWA3 439 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 CDC40O60508 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 ZNF432O94892 652 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 ITGA5P08648 1049 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 CPMP14384 443 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 PEBP1P30086 187 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 ECH1Q13011 328 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 C2orf76Q3KRA6 126 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 FAM109BQ6ICB4 259 aaPredicted RBP15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 UNQ6126/PRO20091Q6UXV3 157 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 USP53Q70EK8 1073 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 SLC16A9Q7RTY1 509 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 ZAR1Q86SH2 424 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 ZNF511Q8NB15 262 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 OR10AC1Q8NH08 325 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 PAQR8Q8TEZ7 354 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 MCHR2Q969V1 340 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 GAL3ST3Q96A11 431 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 PIK3IP1Q96FE7 263 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 RAB11FIP5Q9BXF6 653 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 TRIM2Q9C040 744 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 TINAGL1Q9GZM7 467 aaPredicted RBP15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 KCNK15Q9H427 330 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 UQCC1Q9NVA1 299 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 NOP16Q9Y3C1 178 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 WNT6Q9Y6F9 365 aa15.53■□□□□ 0.08
SQSTM1-211ENST00000506690 A0A1B0GTH9 108 aa15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 C1QTNF3-AMACRE9PGA6 284 aa15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 SMAD9O15198 467 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 AK1P00568 194 aa15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 ZNF888P0CJ79 500 aaPredicted RBP15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 SNRPEP62304 92 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 HABP2Q14520 560 aaPredicted RBP15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 ZNF234Q14588 700 aa15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 ZNF425Q6IV72 752 aa15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 SLC16A13Q7RTY0 426 aa15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 INO80EQ8NBZ0 244 aaPredicted RBP15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 OR51A4Q8NGJ6 313 aa15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 ZBTB8AQ96BR9 441 aa15.52■□□□□ 0.08
SQSTM1-211ENST00000506690 COLCA2A8K830 154 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 M0QYG6 137 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 HLA-AP01891 365 aaKnown RBP15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 AMY2AP04746 511 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 CISD3P0C7P0 127 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 NFYBP25208 207 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 MAP3K8P41279 467 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 CXADRP78310 365 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 TOMM20Q15388 145 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 ALG11Q2TAA5 492 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 FNDC3BQ53EP0 1204 aaKnown RBP15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 ZNF600Q6ZNG1 722 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 SLC30A7Q8NEW0 376 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 OR52E1Q8NGJ3 308 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 ING5Q8WYH8 240 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 FAM3DQ96BQ1 224 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 MMP26Q9NRE1 261 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 HCFC1R1Q9NWW0 138 aa15.52■□□□□ 0.07
SQSTM1-211ENST00000506690 LOC100289279A0A1B0GTE1 492 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 EIF1BO60739 113 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 LILRB3O75022 631 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 PCCBP05166 539 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 C8AP07357 584 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 EIF1P41567 113 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 EMDP50402 254 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 ARHGAP40Q5TG30 622 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 VN1R4Q7Z5H5 301 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 OR13C8Q8NGS7 320 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 OR2G2Q8NGZ5 317 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 GPR148Q8TDV2 347 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 RNF141Q8WVD5 230 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 TCEAL3Q969E4 200 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 ADAD1Q96M93 576 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 DNAJB12Q9NXW2 375 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 ZNF346Q9UL40 294 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 C5orf52A6NGY3 159 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 GNB5O14775 395 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 YKT6O15498 198 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 ALOX12BO75342 701 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 CD74P04233 296 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 DDX6P26196 483 aaKnown RBP eCLIP15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 PRKXP51817 358 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 RAB5BP61020 215 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 KCNAB1Q14722 419 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 RBMS3Q6XE24 437 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 MISPQ8IVT2 679 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 PAQR4Q8N4S7 273 aaPredicted RBP15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 TOX2Q96NM4 488 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 TREM1Q9NP99 234 aa15.51■□□□□ 0.07
SQSTM1-211ENST00000506690 A0A087WV62 115 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 SCAMP1O15126 338 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 OR2T1O43869 369 aa15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 TPT1P13693 172 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-211ENST00000506690 ZBTB25P24278 435 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms