RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TSPAN19P0C672 248 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 CCL2P13500 99 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 ERVS71-1P61550 626 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 RAB1AP62820 205 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 RPL18Q07020 188 aaKnown RBP11.29□□□□□ -0.6
DDX41-204ENST00000504807 HNRNPA0Q13151 305 aaKnown RBP11.29□□□□□ -0.6
DDX41-204ENST00000504807 DAG1Q14118 895 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 HIST3H3Q16695 136 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 DEF8Q6ZN54 512 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 POU5F2Q8N7G0 328 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 OR8J3Q8NGG0 315 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 C10orf82Q8WW14 230 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 ZNF347Q96SE7 839 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 SEPHS2Q99611 448 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 SYT3Q9BQG1 590 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 EVA1AQ9H8M9 152 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 NANSQ9NR45 359 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 TMEM38BQ9NVV0 291 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 CMTM6Q9NX76 183 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 GLTPQ9NZD2 209 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 ZNF229Q9UJW7 825 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 KCNS2Q9ULS6 477 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 POFUT2Q9Y2G5 429 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 SNX13Q9Y5W8 968 aa11.29□□□□□ -0.6
DDX41-204ENST00000504807 MALRD1Q5VYJ5 2156 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 ZNF726A6NNF4 738 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 WNT9BO14905 357 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 RNF13O43567 381 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 LILRA1O75019 489 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 OR7A10O76100 309 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 CSF3P09919 207 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 DAOP14920 347 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 TCN1P20061 433 aaPredicted RBP11.28□□□□□ -0.6
DDX41-204ENST00000504807 HNF1AP20823 631 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 AQP2P41181 271 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 ALDH3B1P43353 468 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 ARFIP2P53365 341 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 GUCY1A3Q02108 690 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 FMODQ06828 376 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 FHL1Q13642 323 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 ELFN2Q5R3F8 820 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 SLC22A24Q8N4F4 322 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 CLDN22Q8N7P3 220 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 GTF3AQ92664 365 aaKnown RBP11.28□□□□□ -0.6
DDX41-204ENST00000504807 MRPL24Q96A35 216 aaKnown RBP11.28□□□□□ -0.6
DDX41-204ENST00000504807 NMD3Q96D46 503 aaKnown RBP11.28□□□□□ -0.6
DDX41-204ENST00000504807 SLC25A44Q96H78 314 aaPredicted RBP11.28□□□□□ -0.6
DDX41-204ENST00000504807 TSPAN32Q96QS1 320 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 SIKE1Q9BRV8 207 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 PIMREGQ9BSJ6 248 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 MRPL13Q9BYD1 178 aaKnown RBP11.28□□□□□ -0.6
DDX41-204ENST00000504807 RIMS3Q9UJD0 308 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 UGT2A1Q9Y4X1 527 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 FKBP7Q9Y680 259 aa11.28□□□□□ -0.6
DDX41-204ENST00000504807 LOC390937A0A1W2PQ73 354 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 BLOC1S5-TXNDC5H3BN57 136 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 J3KTA2 159 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 DHHO43323 396 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 NCR1O76036 304 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 SLC2A10O95528 541 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 CLPTM1O96005 669 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 HPXP02790 462 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 MT-ND1P03886 318 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 QDPRP09417 244 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 BMP4P12644 408 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 ZNF23P17027 643 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 CDAP32320 146 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 RBMXP38159 391 aaKnown RBP11.27□□□□□ -0.61
DDX41-204ENST00000504807 RIN1Q13671 783 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 CYLC2Q14093 348 aaPredicted RBP11.27□□□□□ -0.61
DDX41-204ENST00000504807 LAPTM4AQ15012 233 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 ALKBH6Q3KRA9 238 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 CYBRD1Q53TN4 286 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 ARMC4Q5T2S8 1044 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 TSEN54Q7Z6J9 526 aaKnown RBP11.27□□□□□ -0.61
DDX41-204ENST00000504807 SLC30A8Q8IWU4 369 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 RFLNBQ8N5W9 214 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 SYT14Q8NB59 555 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 OR4K5Q8NGD3 323 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 SLC26A7Q8TE54 656 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 ASB10Q8WXI3 467 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 HDAC2Q92769 488 aaKnown RBP11.27□□□□□ -0.61
DDX41-204ENST00000504807 MCHR2Q969V1 340 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 ZNF566Q969W8 418 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 RCN3Q96D15 328 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 MPP4Q96JB8 637 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 SLC19A3Q9BZV2 496 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 MAN2C1Q9NTJ4 1040 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 A4GNTQ9UNA3 340 aa11.27□□□□□ -0.61
DDX41-204ENST00000504807 FAM220BPB1ANY3 271 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 NDUFS8O00217 210 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 FFAR1O14842 300 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 TRMUO75648 421 aaKnown RBP11.26□□□□□ -0.61
DDX41-204ENST00000504807 OR6A2O95222 327 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 MMP7P09237 267 aaPredicted RBP11.26□□□□□ -0.61
DDX41-204ENST00000504807 UMPSP11172 480 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 APEHP13798 732 aaKnown RBP11.26□□□□□ -0.61
DDX41-204ENST00000504807 ZNF26P17031 533 aaPredicted RBP11.26□□□□□ -0.61
DDX41-204ENST00000504807 MAKP20794 623 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 PAX7P23759 505 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms