RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 ZMYND19Q96E35 227 aaPredicted RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 DTNBP1Q96EV8 351 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 TMEM80Q96HE8 168 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 OR5M11Q96RB7 305 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 TEX12Q9BXU0 123 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 NDEL1Q9GZM8 345 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 NUAK2Q9H093 628 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 RACGAP1Q9H0H5 632 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 OR51V1Q9H2C8 321 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 MRPL22Q9NWU5 206 aaKnown RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 FOXD3Q9UJU5 478 aaPredicted RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 COPS3Q9UNS2 423 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 B9D1Q9UPM9 204 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 KLHDC2Q9Y2U9 406 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 NOX1Q9Y5S8 564 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 FLVCR1Q9Y5Y0 555 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 FKBP7Q9Y680 259 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 COMMD3-BMI1R4GMX3 469 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 TLN1Q9Y490 2541 aaKnown RBP9.23□□□□□ -0.93
TPM3-217ENST00000504663 IGKV3D-15A0A087WSY6 115 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 TRGV5A0A0B4J1U4 118 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 SLC35F4A4IF30 521 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 A6NIZ1 184 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 FAM171A2A8MVW0 826 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 NPIPA5E9PKD4 350 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 MKRN2OSH3BPM6 223 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 AQP7O14520 342 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 TFECO14948 347 aaPredicted RBP9.23□□□□□ -0.93
TPM3-217ENST00000504663 AQP8O94778 261 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 VAMP5O95183 116 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 RAB36O95755 333 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 BCL10O95999 233 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 LALBAP00709 142 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 SCG5P05408 212 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 MRPL3P09001 348 aaKnown RBP9.23□□□□□ -0.93
TPM3-217ENST00000504663 PAICSP22234 425 aaKnown RBP9.23□□□□□ -0.93
TPM3-217ENST00000504663 CARD18P57730 90 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 RAP1BP61224 184 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 RAP1AP62834 184 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 CXADRP78310 365 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 INAQ16352 499 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 KLHL12Q53G59 568 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 SLC25A47Q6Q0C1 308 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 FOXL2NBQ6ZUU3 175 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 NANOGP1Q8N7R0 232 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 OR51G2Q8NGK0 314 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 ABHD3Q8WU67 409 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 CPNE4Q96A23 557 aaPredicted RBP9.23□□□□□ -0.93
TPM3-217ENST00000504663 RNF166Q96A37 237 aaPredicted RBP9.23□□□□□ -0.93
TPM3-217ENST00000504663 OR2M2Q96R28 347 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 TUBA1CQ9BQE3 449 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 ALG12Q9BV10 488 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 SF3B5Q9BWJ5 86 aaKnown RBP9.23□□□□□ -0.93
TPM3-217ENST00000504663 PRORYQ9H606 182 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 NPIPA1Q9UND3 350 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 B3GNT3Q9Y2A9 372 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 UGT2A1Q9Y4X1 527 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 CEPT1Q9Y6K0 416 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 ARHGAP21Q5T5U3 1957 aa9.23□□□□□ -0.93
TPM3-217ENST00000504663 TMEM129A0AVI4 362 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 AHCYL1O43865 530 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 WNT11O96014 354 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 FAM87AP0C7U9 286 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 DCKP27707 260 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 TDGF1P3P51864 188 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 CLDN17P56750 224 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 LGALS3BPQ08380 585 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 GUSBP1Q15486 140 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 KLHL22Q53GT1 634 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 ZNF684Q5T5D7 378 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 OTPQ5XKR4 325 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 LRFN4Q6PJG9 635 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 LRRC69Q6ZNQ3 347 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 SLC16A12Q6ZSM3 486 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 FCRLAQ7L513 359 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 LINGO2Q7L985 606 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 GPAT4Q86UL3 456 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 STX19Q8N4C7 294 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 SVOPQ8N4V2 548 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 KDF1Q8NAX2 398 aaPredicted RBP9.22□□□□□ -0.93
TPM3-217ENST00000504663 ZNF511Q8NB15 262 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 C9orf43Q8TAL5 461 aaPredicted RBP9.22□□□□□ -0.93
TPM3-217ENST00000504663 FNDC9Q8TBE3 224 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 TMEM45BQ96B21 275 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 OTULINQ96BN8 352 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 YIPF6Q96EC8 236 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 OPALINQ96PE5 141 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 NAA11Q9BSU3 229 aaPredicted RBP9.22□□□□□ -0.93
TPM3-217ENST00000504663 CCDC90BQ9GZT6 254 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 NAA50Q9GZZ1 169 aaKnown RBP9.22□□□□□ -0.93
TPM3-217ENST00000504663 BATF3Q9NR55 127 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 ERVK13-1Q9NX77 482 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 LUZP4Q9P127 313 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 CLCF1Q9UBD9 225 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 MOKQ9UQ07 419 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 SNX5Q9Y5X3 404 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 PKD1L2Q7Z442 2459 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 MED12LQ86YW9 2145 aa9.22□□□□□ -0.93
TPM3-217ENST00000504663 DSPP15924 2871 aaKnown RBP9.22□□□□□ -0.93
TPM3-217ENST00000504663 PHF3Q92576 2039 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 300.2 ms