RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 EPXP11678 715 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 NR2C1P13056 603 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 COX6B1P14854 86 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 SDHAP31040 664 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 ACVR1BP36896 505 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 RPS6KA3P51812 740 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 ZNF133P52736 654 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 CLRN1P58418 232 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 TOP3AQ13472 1001 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 SNTB1Q13884 538 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 TSC22D1Q15714 1073 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 CEACAM16Q2WEN9 425 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 FAHD1Q6P587 224 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 LRFN4Q6PJG9 635 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 KLHL17Q6TDP4 642 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 ATG16L2Q8NAA4 619 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 NOXO1Q8NFA2 376 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 OR52L1Q8NGH7 329 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 LINC01560Q8TB33 94 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 FNDC8Q8TC99 324 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 HDAC2Q92769 488 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 NMD3Q96D46 503 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 ZNF570Q96NI8 536 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 DACH2Q96NX9 599 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 WFIKKN1Q96NZ8 548 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 PKP2Q99959 881 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 ULBP2Q9BZM5 246 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 EGLN3Q9H6Z9 239 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 CRLF2Q9HC73 371 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 REV1Q9UBZ9 1251 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 KCNN3Q9UGI6 736 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 IL20RAQ9UHF4 553 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 IER3IP1Q9Y5U9 82 aa10.46□□□□□ -0.73
PDLIM5-208ENST00000504489 HECTD1Q9ULT8 2610 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 ROS1P08922 2347 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 DSCAMO60469 2012 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 OR5H1A6NKK0 313 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 ZNF99A8MXY4 864 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 XKRYO14609 159 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 RAD51DO75771 328 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 PPP1R3DO95685 299 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 QDPRP09417 244 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 ZNF23P17027 643 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 DAPP51397 102 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 KRR1Q13601 381 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 MESTQ5EB52 335 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 TIMM23BQ5SRD1 257 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 THEM4Q5T1C6 240 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 C9orf135Q5VTT2 229 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 ANKRD34AQ69YU3 496 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 ANKRD16Q6P6B7 361 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 C22orf34Q6ZV56 151 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 ZNF627Q7L945 461 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 SSX8Q7RTT4 187 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 ADCK1Q86TW2 530 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 C17orf78Q8N4C9 275 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 SYT14Q8NB59 555 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 OR8D4Q8NGM9 314 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 OR1K1Q8NGR3 316 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 MAGEE2Q8TD90 523 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 HSD17B8Q92506 261 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 BCL2L2Q92843 193 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 STMN2Q93045 179 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 MCHR2Q969V1 340 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 S100PBPQ96BU1 408 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 ZNF837Q96EG3 531 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 ERMAPQ96PL5 475 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 RBP7Q96R05 134 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 MED18Q9BUE0 208 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 IFT27Q9BW83 186 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 OSBPL10Q9BXB5 764 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 PLA2G12AQ9BZM1 189 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 GABARAPL1Q9H0R8 117 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 SEMA6AQ9H2E6 1030 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 SMURF2Q9HAU4 748 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 CRIM1Q9NZV1 1036 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 BAIAP2Q9UQB8 552 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 CENPEQ02224 2701 aa10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 RAI1Q7Z5J4 1906 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-208ENST00000504489 DCHS2Q6V1P9 2916 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 CELSR2Q9HCU4 2923 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 TEX13CA0A0J9YWL9 993 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 SLC22A23A1A5C7 686 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 PRSS37A4D1T9 235 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 BHLHE40O14503 412 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 SOCS2O14508 198 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 ARHGEF9O43307 516 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 DHHO43323 396 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 THBDP07204 575 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 OSMP13725 252 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 ARF1P84077 181 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 CD47Q08722 323 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 DAZAP2Q15038 168 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 TAB1Q15750 504 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 C10orf128Q5T292 105 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 KDM4DQ6B0I6 523 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 SLC25A47Q6Q0C1 308 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 PQLC1Q8N2U9 271 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 LNX2Q8N448 690 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 RASD2Q96D21 266 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms