RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 C11orf24Q96F05 449 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 BIRC8Q96P09 236 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 OR52B2Q96RD2 323 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 LYSMD1Q96S90 227 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 CYP2S1Q96SQ9 504 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 THTPAQ9BU02 230 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 ERVK-6Q9BXR3 956 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 DERL2Q9GZP9 239 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 POMKQ9H5K3 350 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 SUDS3Q9H7L9 328 aaPredicted RBP4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 EFCAB1Q9HAE3 211 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 MEAF6Q9HAF1 191 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 UTP6Q9NYH9 597 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 IL17CQ9P0M4 197 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 STX18Q9P2W9 335 aaKnown RBP4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 SLC7A8Q9UHI5 535 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 BCAP29Q9UHQ4 241 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 ANGPTL2Q9UKU9 493 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 PPIL1Q9Y3C6 166 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 L3MBTL1Q9Y468 752 aa4.28□□□□□ -1.72
UBE2D3-217ENST00000504211 PCM1Q15154 2024 aa4.28□□□□□ -1.73
UBE2D3-217ENST00000504211 A0A0J9YVX5 310 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 A0A0J9YYE9 177 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 OR51F1A6NGY5 319 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 A8MX80 341 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 E9PBE3 544 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 CCL22O00626 93 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 KLHL41O60662 606 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 VPS26AO75436 327 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 SRP72O76094 671 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 SUPT7LO94864 414 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 DUSP14O95147 198 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 IGSF6O95976 241 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 TRBC1P01850 177 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 PROS1P07225 676 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 KLK2P20151 261 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 HOXA9P31269 272 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 VHLP40337 213 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 CSKP41240 450 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 OR1D4P47884 311 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 PSMD8P48556 350 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 POU3F4P49335 361 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 MRPL19P49406 292 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 ACADVLP49748 655 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 GTF2A1P52655 376 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 MTTPP55157 894 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 XIAPP98170 497 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 BCL2L1Q07817 233 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 STX5Q13190 355 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 DMC1Q14565 340 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 CDKN3Q16667 212 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 LRRC26Q2I0M4 334 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 GSG1Q2KHT4 349 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 FHL5Q5TD97 284 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 HACD2Q6Y1H2 254 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 EFL1Q7Z2Z2 1120 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 SNX20Q7Z614 316 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 TAF8Q7Z7C8 310 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 PGAM4Q8N0Y7 254 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 Q8N9G6 341 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 OR52J3Q8NH60 311 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 RFESDQ8TAC1 157 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 PHOSPHO2Q8TCD6 241 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 DTX3LQ8TDB6 740 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 DDI1Q8WTU0 396 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 PIH1D2Q8WWB5 315 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 TMEM186Q96B77 213 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 ECHDC3Q96DC8 303 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 SERPINI1Q99574 410 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 CCT7Q99832 543 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 WDR55Q9H6Y2 383 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 MRPL40Q9NQ50 206 aaKnown RBP4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 BATF3Q9NR55 127 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 VNN3Q9NY84 501 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 HS3ST2Q9Y278 367 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 DHRS7Q9Y394 339 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 RALGAPA1Q6GYQ0 2036 aa4.27□□□□□ -1.73
UBE2D3-217ENST00000504211 CROCCQ5TZA2 2017 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 BRCA2P51587 3418 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 BBIP1A8MTZ0 92 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 WASH3PC4AMC7 463 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 C11orf98E9PRG8 122 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 C5orf67F2Z3F1 127 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 UBXN8O00124 270 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 SLC17A2O00624 439 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 UBFD1O14562 309 aaKnown RBP4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 PRMT5O14744 637 aaPredicted RBP4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 AZIN1O14977 448 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 UBDO15205 165 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 CDK14O94921 469 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 TSPAN12O95859 305 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 SLC4A1P02730 911 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 RPS17P08708 135 aaKnown RBP4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 PIRTP0C851 137 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 GFAPP14136 432 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 ZNF7P17097 686 aaPredicted RBP4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 ATP6V1C1P21283 382 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 METAP1P53582 386 aa4.26□□□□□ -1.73
UBE2D3-217ENST00000504211 PKNOX1P55347 436 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms