RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 FAM181BA6NEQ2 426 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 ZSCAN5BA6NJL1 495 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 ZNF726A6NNF4 738 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 TIMM23O14925 209 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 MFN2O95140 757 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 IGHV2-70P01814 119 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 MT-ND5P03915 603 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 ETFAP13804 333 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 DRD4P21917 467 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 CSNK1A1P48729 337 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 MMP15P51511 669 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 CLNS1AP54105 237 aaKnown RBP13.16□□□□□ -0.3
HDAC6-236ENST00000498808 CRISP3P54108 245 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 RAG2P55895 527 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 RELBQ01201 579 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 MOGQ16653 247 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 OLFML2AQ68BL7 652 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 ASPHD2Q6ICH7 369 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 PARP8Q8N3A8 854 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 PATZ1Q9HBE1 687 aaKnown RBP13.16□□□□□ -0.3
HDAC6-236ENST00000498808 SLC6A13Q9NSD5 602 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 CALML5Q9NZT1 146 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 NPTNQ9Y639 398 aa13.16□□□□□ -0.3
HDAC6-236ENST00000498808 A0A1B0GWA3 101 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 A8MXK9 166 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 HOXA3O43365 443 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-236ENST00000498808 SERPINI2O75830 405 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 PLATP00750 562 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 BGLAPP02818 100 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 SBK2P0C263 348 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 HTR2AP28223 471 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 SLC6A9P48067 706 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 PAX8Q06710 450 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 PUDPQ08623 228 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 TBC1D28Q2M2D7 210 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 ZNF362Q5T0B9 420 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-236ENST00000498808 IFT20Q8IY31 132 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 SCAIQ8N9R8 606 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 OR52E2Q8NGJ4 325 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 OR1J1Q8NGS3 322 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 OR4F5Q8NH21 305 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 GEMIN6Q8WXD5 167 aaKnown RBP13.15□□□□□ -0.3
HDAC6-236ENST00000498808 TMEM54Q969K7 222 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 UBE2FQ969M7 185 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 TMEM19Q96HH6 336 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 RSPO3Q9BXY4 272 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-236ENST00000498808 C1orf198Q9H425 327 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 TMEM38BQ9NVV0 291 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 RPS6KB2Q9UBS0 482 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 EGFL7Q9UHF1 273 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 ZNF232Q9UNY5 417 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 GPR45Q9Y5Y3 372 aa13.15□□□□□ -0.3
HDAC6-236ENST00000498808 LRRN3E7EW58 273 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 KRT75O95678 551 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 IL12AP29459 219 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 CD80P33681 288 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 MPV17P39210 176 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 NME5P56597 212 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 UFM1P61960 85 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 ZNF781Q8N8C0 355 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 LSMEM1Q8N8F7 131 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 MNS1Q8NEH6 495 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 OR6S1Q8NH40 331 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 IPCEF1Q8WWN9 437 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-236ENST00000498808 SLC35B4Q969S0 331 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 MOGAT1Q96PD6 335 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 DCLRE1CQ96SD1 692 aaKnown RBP13.14□□□□□ -0.31
HDAC6-236ENST00000498808 DIRC2Q96SL1 478 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 ARMC7Q9H6L4 198 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 RNF121Q9H920 327 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 PPCSQ9HAB8 311 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 MRPL39Q9NYK5 338 aaKnown RBP13.14□□□□□ -0.31
HDAC6-236ENST00000498808 GLTPQ9NZD2 209 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 C1RLQ9NZP8 487 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 IFT52Q9Y366 437 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 RYR3Q15413 4870 aa13.14□□□□□ -0.31
HDAC6-236ENST00000498808 A0A0G2JPF8 293 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 HNRNPCL2B2RXH8 293 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 HNRNPCL3B7ZW38 293 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 F5H0A9 414 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-236ENST00000498808 ITM2AO43736 263 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 HNRNPCL1O60812 293 aaKnown RBP13.13□□□□□ -0.31
HDAC6-236ENST00000498808 SPAG7O75391 227 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 TSPAN15O95858 294 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 NGFP01138 241 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 ADH4P08319 380 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 HNRNPCL4P0DMR1 293 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 CRATP43155 626 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 BIDP55957 195 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 DSTNP60981 165 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 ALG10BQ5I7T1 473 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 SPATA46Q5T0L3 261 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 TMEM53Q6P2H8 277 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 LRFN4Q6PJG9 635 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 PXKQ7Z7A4 578 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 COMTD1Q86VU5 262 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 ZNF101Q8IZC7 436 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 SPICQ8N5J4 248 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 OR4K5Q8NGD3 323 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 OR1J2Q8NGS2 313 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms