RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 DPY19L2P2Q6ZN68 376 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 FAM214BQ7L5A3 538 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 HIST3H2AQ7L7L0 130 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 BTLAQ7Z6A9 289 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 OR6S1Q8NH40 331 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 HIST1H2ACQ93077 130 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 RNASE6Q93091 150 aaKnown RBP14.36□□□□□ -0.11
LMNA-217ENST00000498722 STARD4Q96DR4 205 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 TMEM80Q96HE8 168 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 RBM24Q9BX46 236 aaKnown RBP14.36□□□□□ -0.11
LMNA-217ENST00000498722 CDCA4Q9BXL8 241 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 OPN3Q9H1Y3 402 aaPredicted RBP14.36□□□□□ -0.11
LMNA-217ENST00000498722 C12orf49Q9H741 205 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 CMC2Q9NRP2 79 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 MRPS18AQ9NVS2 196 aaKnown RBP14.36□□□□□ -0.11
LMNA-217ENST00000498722 KLHL21Q9UJP4 597 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 ZNF229Q9UJW7 825 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 PROCRQ9UNN8 238 aa14.36□□□□□ -0.11
LMNA-217ENST00000498722 RIIAD1A6NNX1 92 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 H3BSA7 217 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 SMAD9O15198 467 aaKnown RBP14.35□□□□□ -0.11
LMNA-217ENST00000498722 IDH3BO43837 385 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 ZNF3P17036 446 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 NOS3P29474 1203 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 IDUAP35475 653 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 CDH11P55287 796 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 RPS4XP62701 263 aaKnown RBP14.35□□□□□ -0.11
LMNA-217ENST00000498722 SLC35A1P78382 337 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 EGR4Q05215 589 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 RASGEF1BQ0VAM2 473 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 TMED1Q13445 227 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 FHL1Q13642 323 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 ARMC4Q5T2S8 1044 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 UBE2UQ5VVX9 321 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 RNLSQ5VYX0 342 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 THSD4Q6ZMP0 1018 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 CXXC5Q7LFL8 322 aaKnown RBP14.35□□□□□ -0.11
LMNA-217ENST00000498722 CLVS1Q8IUQ0 354 aaPredicted RBP14.35□□□□□ -0.11
LMNA-217ENST00000498722 GPX7Q96SL4 187 aaPredicted RBP14.35□□□□□ -0.11
LMNA-217ENST00000498722 TAPBPLQ9BX59 468 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 GALNT8Q9NY28 637 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 KLHL9Q9P2J3 617 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 IL20RAQ9UHF4 553 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 HIF3AQ9Y2N7 669 aa14.35□□□□□ -0.11
LMNA-217ENST00000498722 PRR23D1E9PI22 279 aaPredicted RBP14.34□□□□□ -0.11
LMNA-217ENST00000498722 MSTNO14793 375 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 OR2T1O43869 369 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 SS18L1O75177 396 aaPredicted RBP14.34□□□□□ -0.11
LMNA-217ENST00000498722 TRMUO75648 421 aaKnown RBP14.34□□□□□ -0.11
LMNA-217ENST00000498722 PPP1R3DO95685 299 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 RAB36O95755 333 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 ASAH2BP0C7U1 165 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 PRR23D2P0DMB1 279 aaPredicted RBP14.34□□□□□ -0.11
LMNA-217ENST00000498722 KLK2P20151 261 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 PAICSP22234 425 aaKnown RBP14.34□□□□□ -0.11
LMNA-217ENST00000498722 DCKP27707 260 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 AGTR1P30556 359 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 RPL4P36578 427 aaKnown RBP14.34□□□□□ -0.11
LMNA-217ENST00000498722 MAP2K4P45985 399 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 RAB40BQ12829 278 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 IRF3Q14653 427 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 OR7A5Q15622 319 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 CNPY1Q3B7I2 92 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 SYT6Q5T7P8 510 aaPredicted RBP14.34□□□□□ -0.11
LMNA-217ENST00000498722 AADACL4Q5VUY2 407 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 C1orf140Q5VVS0 124 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 TUSC5Q8IXB3 177 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 OR6K3Q8NGY3 331 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 RACGAP1Q9H0H5 632 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 KLHL13Q9P2N7 655 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 FOXD3Q9UJU5 478 aaPredicted RBP14.34□□□□□ -0.11
LMNA-217ENST00000498722 GPR52Q9Y2T5 361 aa14.34□□□□□ -0.11
LMNA-217ENST00000498722 IMPA2O14732 288 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 ARPC3O15145 178 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 CYTIPO60759 359 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 AHSA1O95433 338 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 BGLAPP02818 100 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 IMPDH2P12268 514 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 APEHP13798 732 aaKnown RBP14.33□□□□□ -0.12
LMNA-217ENST00000498722 GTF2E2P29084 291 aaKnown RBP14.33□□□□□ -0.12
LMNA-217ENST00000498722 C21orf33P30042 268 aaPredicted RBP14.33□□□□□ -0.12
LMNA-217ENST00000498722 HTR1FP30939 366 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 RPS5P46782 204 aaKnown RBP14.33□□□□□ -0.12
LMNA-217ENST00000498722 MTNR1AP48039 350 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 SH3BGRP55822 239 aaPredicted RBP14.33□□□□□ -0.12
LMNA-217ENST00000498722 MFSD13AQ14CX5 517 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 GUSBP1Q15486 140 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 FBXL19-AS1Q494R0 122 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 FAM69AQ5T7M9 428 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 ZNF367Q7RTV3 350 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 NANOGNBQ7Z5D8 188 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 ALDH16A1Q8IZ83 802 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 LRRC17Q8N6Y2 441 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 ZNF610Q8N9Z0 462 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 ZNF775Q96BV0 537 aaPredicted RBP14.33□□□□□ -0.12
LMNA-217ENST00000498722 KTI12Q96EK9 354 aaPredicted RBP14.33□□□□□ -0.12
LMNA-217ENST00000498722 RNFT2Q96EX2 444 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 ERMAPQ96PL5 475 aaPredicted RBP14.33□□□□□ -0.12
LMNA-217ENST00000498722 SPOCK3Q9BQ16 436 aa14.33□□□□□ -0.12
LMNA-217ENST00000498722 NAA11Q9BSU3 229 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms