RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SAP30LQ9HAJ7 183 aa12.49□□□□□ -0.41
TRAF4-212ENST00000498540 NTN4Q9HB63 628 aa12.49□□□□□ -0.41
TRAF4-212ENST00000498540 CDH20Q9HBT6 801 aa12.49□□□□□ -0.41
TRAF4-212ENST00000498540 SSU72Q9NP77 194 aaKnown RBP12.49□□□□□ -0.41
TRAF4-212ENST00000498540 TCF7L2Q9NQB0 619 aa12.49□□□□□ -0.41
TRAF4-212ENST00000498540 TMEM38BQ9NVV0 291 aa12.49□□□□□ -0.41
TRAF4-212ENST00000498540 SLCO1C1Q9NYB5 712 aa12.49□□□□□ -0.41
TRAF4-212ENST00000498540 GLTPQ9NZD2 209 aa12.49□□□□□ -0.41
TRAF4-212ENST00000498540 TESQ9UGI8 421 aaKnown RBP12.49□□□□□ -0.41
TRAF4-212ENST00000498540 SLC22A23A1A5C7 686 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 CLIC1O00299 241 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 HDAC3O15379 428 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 TPST2O60704 377 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 SNAP29O95721 258 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 ADORA3P0DMS8 318 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 OR8G3PP0DMU2 310 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 KITP10721 976 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 HOXB9P17482 250 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-212ENST00000498540 MAKP20794 623 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 GATA3P23771 443 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 FPR2P25090 351 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 NCALDP61601 193 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 FADDQ13158 208 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 OR1Q1Q15612 314 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 TUSC1Q2TAM9 212 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 HFEQ30201 348 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 KRT71Q3SY84 523 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 LRFN4Q6PJG9 635 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 SLC2A7Q6PXP3 512 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 TREML4Q6UXN2 200 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 C10orf111Q8N326 155 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 OR5J2Q8NH18 312 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 AENQ8WTP8 325 aaKnown RBP12.48□□□□□ -0.41
TRAF4-212ENST00000498540 C11orf40Q8WZ69 217 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 GTF2H4Q92759 462 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 LRRC58Q96CX6 371 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 TIMD4Q96H15 378 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 GAL3ST1Q99999 423 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 SDR39U1Q9NRG7 319 aaPredicted RBP12.48□□□□□ -0.41
TRAF4-212ENST00000498540 DECR2Q9NUI1 292 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 SELENONQ9NZV5 590 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 ZIM2Q9NZV7 527 aa12.48□□□□□ -0.41
TRAF4-212ENST00000498540 DNAJC9-AS1A6NH13 148 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 TRPC5OSA6NMA1 111 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 RGS16O15492 202 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-212ENST00000498540 POLR2JP52435 117 aaKnown RBP12.47□□□□□ -0.41
TRAF4-212ENST00000498540 CDH12P55289 794 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 UCP2P55851 309 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 RGS8P57771 180 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-212ENST00000498540 HNRNPA0Q13151 305 aaKnown RBP12.47□□□□□ -0.41
TRAF4-212ENST00000498540 MELKQ14680 651 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 TBC1D28Q2M2D7 210 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 TMEM255AQ5JRV8 349 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 TMEM53Q6P2H8 277 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 SLC35D2Q76EJ3 337 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 OR4K5Q8NGD3 323 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 OR6X1Q8NH79 312 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 RAB1CQ92928 201 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 MAELQ96JY0 434 aaKnown RBP12.47□□□□□ -0.41
TRAF4-212ENST00000498540 C1orf147Q96MC9 270 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-212ENST00000498540 PAIP2Q9BPZ3 127 aaKnown RBP12.47□□□□□ -0.41
TRAF4-212ENST00000498540 TMEM43Q9BTV4 400 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 RAD21L1Q9H4I0 556 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 RNF121Q9H920 327 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 UNKLQ9H9P5 680 aaKnown RBP12.47□□□□□ -0.41
TRAF4-212ENST00000498540 TMEM27Q9HBJ8 222 aa12.47□□□□□ -0.41
TRAF4-212ENST00000498540 ISPDA4D126 451 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 DHHO43323 396 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 MFN2O95140 757 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 FARS2O95363 451 aaKnown RBP12.46□□□□□ -0.41
TRAF4-212ENST00000498540 MT-ATP6P00846 226 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 PRTN3P24158 256 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 ZFP36P26651 326 aaKnown RBP12.46□□□□□ -0.41
TRAF4-212ENST00000498540 GCNT6Q5T4J0 391 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 RBMS3Q6XE24 437 aaKnown RBP12.46□□□□□ -0.41
TRAF4-212ENST00000498540 DOK3Q7L591 496 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 MAVSQ7Z434 540 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 RETREG3Q86VR2 466 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 MSRB3Q8IXL7 192 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 DEFB108BQ8NET1 73 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 CCL17Q92583 94 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 ZNF566Q969W8 418 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 ZBTB9Q96C00 473 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 ELMOD3Q96FG2 381 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 BCL2L14Q9BZR8 327 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 C1orf198Q9H425 327 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 KCNK9Q9NPC2 374 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 SLC25A37Q9NYZ2 338 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 UBAP1Q9NZ09 502 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 ZNF69Q9UC07 566 aa12.46□□□□□ -0.41
TRAF4-212ENST00000498540 VWFP04275 2813 aa12.46□□□□□ -0.42
TRAF4-212ENST00000498540 SPRY3O43610 288 aa12.45□□□□□ -0.42
TRAF4-212ENST00000498540 SNNO75324 88 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-212ENST00000498540 IGHV1-46P01743 117 aa12.45□□□□□ -0.42
TRAF4-212ENST00000498540 IGHV3-13P01766 116 aa12.45□□□□□ -0.42
TRAF4-212ENST00000498540 MT-ND5P03915 603 aa12.45□□□□□ -0.42
TRAF4-212ENST00000498540 PGA4P0DJD7 388 aa12.45□□□□□ -0.42
TRAF4-212ENST00000498540 PGA3P0DJD8 388 aa12.45□□□□□ -0.42
TRAF4-212ENST00000498540 DRD4P21917 467 aa12.45□□□□□ -0.42
TRAF4-212ENST00000498540 ZNF81P51508 661 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms