RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 A0A1B0GX12 115 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 C11orf98E9PRG8 122 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 CLIC1O00299 241 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 POLR3GO15318 223 aaPredicted RBP13.67□□□□□ -0.22
MUC1-220ENST00000498431 FSHBP01225 129 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 ETS2P15036 469 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 ZNF250P15622 560 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 LSP1P33241 339 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 CRYBB2P43320 205 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 POLR2JP52435 117 aaKnown RBP13.67□□□□□ -0.22
MUC1-220ENST00000498431 KLF3P57682 345 aaPredicted RBP13.67□□□□□ -0.22
MUC1-220ENST00000498431 ZP4Q12836 540 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 DCAF12L2Q5VW00 463 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 FAM91A1Q658Y4 838 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 TMEM154Q6P9G4 183 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 DHRS4L2Q6PKH6 230 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 SLC2A7Q6PXP3 512 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 MSANTD1Q6ZTZ1 278 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 USP51Q70EK9 711 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 PIWIL3Q7Z3Z3 882 aaKnown RBP13.67□□□□□ -0.22
MUC1-220ENST00000498431 PXKQ7Z7A4 578 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 BPIFB2Q8N4F0 458 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 C10orf53Q8N6V4 93 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 SLC30A7Q8NEW0 376 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 SYNPRQ8TBG9 265 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 TMEM54Q969K7 222 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 RAB39BQ96DA2 213 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 SLC47A1Q96FL8 570 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 ZNF747Q9BV97 191 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 C1QTNF5Q9BXJ0 243 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 SDR39U1Q9NRG7 319 aaPredicted RBP13.67□□□□□ -0.22
MUC1-220ENST00000498431 ZIM2Q9NZV7 527 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 FBXL3Q9UKT7 428 aa13.67□□□□□ -0.22
MUC1-220ENST00000498431 TRPC5OSA6NMA1 111 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 C5orf58C9J3I9 102 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 J3QLI3 93 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 EDF1O60869 148 aaKnown RBP13.66□□□□□ -0.22
MUC1-220ENST00000498431 PRSS23O95084 383 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 BCL10O95999 233 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 LCKP06239 509 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 VIMP08670 466 aaKnown RBP13.66□□□□□ -0.22
MUC1-220ENST00000498431 ARAFP10398 606 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 CDH12P55289 794 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 GLO1Q04760 184 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 RBBP4Q09028 425 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 HNRNPA0Q13151 305 aaKnown RBP13.66□□□□□ -0.22
MUC1-220ENST00000498431 FADDQ13158 208 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 OR1Q1Q15612 314 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 LRFN4Q6PJG9 635 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 MAVSQ7Z434 540 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 MSRB3Q8IXL7 192 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 NANPQ8TBE9 248 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 MAELQ96JY0 434 aaKnown RBP13.66□□□□□ -0.22
MUC1-220ENST00000498431 EPYCQ99645 322 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 ZNF696Q9H7X3 374 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 TMEM38BQ9NVV0 291 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 NKIRAS2Q9NYR9 191 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 SLC25A37Q9NYZ2 338 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 GLTPQ9NZD2 209 aa13.66□□□□□ -0.22
MUC1-220ENST00000498431 ADORA3P0DMS8 318 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 OR8G3PP0DMU2 310 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 RAD52P43351 418 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 GYS2P54840 703 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 NCALDP61601 193 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 MELKQ14680 651 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 TSTQ16762 297 aaKnown RBP13.65□□□□□ -0.22
MUC1-220ENST00000498431 PCGF3Q3KNV8 242 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 TMEM255AQ5JRV8 349 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 ICA1LQ8NDH6 482 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 SNX33Q8WV41 574 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 DVL3Q92997 716 aaPredicted RBP13.65□□□□□ -0.22
MUC1-220ENST00000498431 DUX5Q96PT3 197 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 OR52B2Q96RD2 323 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 C7orf69Q9H7B7 122 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 TMEM27Q9HBJ8 222 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 CDH20Q9HBT6 801 aa13.65□□□□□ -0.22
MUC1-220ENST00000498431 TESQ9UGI8 421 aaKnown RBP13.65□□□□□ -0.22
MUC1-220ENST00000498431 PRKDCP78527 4128 aaKnown RBP13.64□□□□□ -0.23
MUC1-220ENST00000498431 CLDN25C9JDP6 229 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 HKR1P10072 659 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 MAKP20794 623 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 RGS8P57771 180 aaPredicted RBP13.64□□□□□ -0.23
MUC1-220ENST00000498431 SELENOVP59797 346 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 LCN2P80188 198 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 PDLIM3Q53GG5 364 aaPredicted RBP13.64□□□□□ -0.23
MUC1-220ENST00000498431 SHISA2Q6UWI4 295 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 SLC35D2Q76EJ3 337 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 SIGLECL1Q8N7X8 197 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 OR4K5Q8NGD3 323 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 OR5J2Q8NH18 312 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 OR6X1Q8NH79 312 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 ZNF519Q8TB69 540 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 C11orf40Q8WZ69 217 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 TMEM43Q9BTV4 400 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 RAD21L1Q9H4I0 556 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 RNF121Q9H920 327 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 TCF7L2Q9NQB0 619 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 SLCO1C1Q9NYB5 712 aa13.64□□□□□ -0.23
MUC1-220ENST00000498431 SELENONQ9NZV5 590 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms