RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 K7EPI3 171 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 ZNF207O43670 478 aaKnown RBP1.65□□□□□ -2.15
SMC4-227ENST00000497984 TOM1O60784 492 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 CLDN9O95484 217 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 IGKV4-1P06312 121 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 IGKV1-13P0DP09 117 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 PRPS2P11908 318 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 SOX6P35712 828 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 HSD17B2P37059 387 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 ARG2P78540 354 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 CDK16Q00536 496 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 ZNF816Q0VGE8 651 aaPredicted RBP1.65□□□□□ -2.15
SMC4-227ENST00000497984 GINS1Q14691 196 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 ZNF684Q5T5D7 378 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 TRIM40Q6P9F5 258 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 ZNF493Q6ZR52 646 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 ECHDC2Q86YB7 292 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 MMAAQ8IVH4 418 aaKnown RBP1.65□□□□□ -2.15
SMC4-227ENST00000497984 SORT1Q99523 831 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 MFFQ9GZY8 342 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 RAB33BQ9H082 229 aa1.65□□□□□ -2.15
SMC4-227ENST00000497984 MSH6P52701 1360 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 K7EQM0 130 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 KMOO15229 486 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 FCMRO60667 390 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 RP2O75695 350 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 RHOBTB1O94844 696 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 IGHV2-5P01817 119 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 DBTP11182 482 aaKnown RBP1.64□□□□□ -2.15
SMC4-227ENST00000497984 SLC2A5P22732 501 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 AK4P27144 223 aaPredicted RBP1.64□□□□□ -2.15
SMC4-227ENST00000497984 VHLP40337 213 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 PON3Q15166 354 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 Q6ZPB1 254 aaPredicted RBP1.64□□□□□ -2.15
SMC4-227ENST00000497984 VSTM4Q8IW00 320 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 RIMKLAQ8IXN7 391 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 OSR2Q8N2R0 312 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 CEP112Q8N8E3 955 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 FAM83FQ8NEG4 500 aaPredicted RBP1.64□□□□□ -2.15
SMC4-227ENST00000497984 OR5D13Q8NGL4 314 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 OR2T34Q8NGX1 318 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 ABHD3Q8WU67 409 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 THRSPQ92748 146 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 DTNBP1Q96EV8 351 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 NARS2Q96I59 477 aaKnown RBP1.64□□□□□ -2.15
SMC4-227ENST00000497984 C16orf45Q96MC5 204 aaPredicted RBP1.64□□□□□ -2.15
SMC4-227ENST00000497984 MTMR9Q96QG7 549 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 OR8B4Q96RC9 309 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 ZNF607Q96SK3 696 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 DOK1Q99704 481 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 RMND5AQ9H871 391 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 C12orf10Q9HB07 376 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 TMOD2Q9NZR1 351 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 S4R3C0 116 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 TET2Q6N021 2002 aaPredicted RBP1.64□□□□□ -2.15
SMC4-227ENST00000497984 CDHR2Q9BYE9 1310 aa1.64□□□□□ -2.15
SMC4-227ENST00000497984 ZNF726A6NNF4 738 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 RAD51BO15315 384 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 SMPD2O60906 423 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 NOL3O60936 208 aaKnown RBP1.63□□□□□ -2.15
SMC4-227ENST00000497984 B3GALNT1O75752 331 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 BCHEP06276 602 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 HSPA5P11021 654 aaKnown RBP1.63□□□□□ -2.15
SMC4-227ENST00000497984 SSR1P43307 286 aaKnown RBP1.63□□□□□ -2.15
SMC4-227ENST00000497984 CCT3P49368 545 aaKnown RBP1.63□□□□□ -2.15
SMC4-227ENST00000497984 OGDHQ02218 1023 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 POU2AF1Q16633 256 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 EXOC3L2Q2M3D2 409 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 HDDC2Q7Z4H3 204 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 CREB3L1Q96BA8 519 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 TM4SF18Q96CE8 201 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 MS4A4EQ96PG1 132 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 SH3GL1Q99961 368 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 AZI2Q9H6S1 392 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 UBE2ZQ9H832 354 aaPredicted RBP1.63□□□□□ -2.15
SMC4-227ENST00000497984 LIN28AQ9H9Z2 209 aaKnown RBP1.63□□□□□ -2.15
SMC4-227ENST00000497984 MCCC2Q9HCC0 563 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 GPATCH2LQ9NWQ4 482 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 PSG8Q9UQ74 426 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 ATP10AO60312 1499 aa1.63□□□□□ -2.15
SMC4-227ENST00000497984 CIB4A0PJX0 185 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 ZNF233A6NK53 670 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 GOLGA8SH3BPF8 625 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 PEX11AO75192 247 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 OR7A10O76100 309 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 IGKV1D-16P01601 117 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 HLA-DPB1P04440 258 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 C2P06681 752 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 HEXBP07686 556 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 C1GALT1C1LP0DN25 315 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 PSMA5P28066 241 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 CD1CP29017 333 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 SERPINB5P36952 375 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 CSNK1A1P48729 337 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 CX3CR1P49238 355 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 ZNF92Q03936 586 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 ELP6Q0PNE2 266 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 TCP10Q12799 353 aa1.62□□□□□ -2.15
SMC4-227ENST00000497984 MRPL28Q13084 256 aaKnown RBP1.62□□□□□ -2.15
SMC4-227ENST00000497984 RABL6Q3YEC7 729 aaPredicted RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms