RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 DHHO43323 396 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 FUT1P19526 365 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 NR4A1P22736 598 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 GIPRP48546 466 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 CLRN1P58418 232 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 RPS23P62266 143 aaKnown RBP13.6□□□□□ -0.23
HDAC4-213ENST00000496347 DAG1Q14118 895 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 TREML1Q86YW5 311 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 SLC22A24Q8N4F4 322 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 ZNF75AQ96N20 296 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 MRPL13Q9BYD1 178 aaKnown RBP13.6□□□□□ -0.23
HDAC4-213ENST00000496347 SMURF2Q9HAU4 748 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 HIF3AQ9Y2N7 669 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 MXRA5Q9NR99 2828 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 GSTA4O15217 222 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 MGRN1O60291 552 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 ZNF682O95780 498 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 F13BP05160 661 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 ZNF35P13682 527 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 PRDX6P30041 224 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 LSP1P33241 339 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 THBS4P35443 961 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 AQP2P41181 271 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 GSK3BP49841 420 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 PDLIM4P50479 330 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 ZNF133P52736 654 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-213ENST00000496347 VLDLRP98155 873 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 GALK2Q01415 458 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 TAF11Q15544 211 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 TMEM249Q2WGJ8 235 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 IFI44LQ53G44 452 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 FAM205BPQ63HN1 556 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 KRT80Q6KB66 452 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 LRFN4Q6PJG9 635 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 VTCN1Q7Z7D3 282 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 SVOPLQ8N434 492 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 BPIFA2Q96DR5 249 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 KCTD14Q9BQ13 255 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-213ENST00000496347 PIMREGQ9BSJ6 248 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 RAB1BQ9H0U4 201 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 MYLK2Q9H1R3 596 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 C1orf198Q9H425 327 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 SPAG4Q9NPE6 437 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 MAN2C1Q9NTJ4 1040 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 SLC7A8Q9UHI5 535 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 COL6A5A8TX70 2615 aa13.59□□□□□ -0.23
HDAC4-213ENST00000496347 PIP5K1CO60331 668 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 LY6HO94772 140 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 IGHMP01871 453 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 SERPINA5P05154 406 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 QDPRP09417 244 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 EVX1P49640 407 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 ZNF84P51523 738 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 RAB1AP62820 205 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 PIGFQ07326 219 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 TRAM2Q15035 370 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 ANKDD1AQ495B1 522 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 SLC36A2Q495M3 483 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 ALG10Q5BKT4 473 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 C10orf128Q5T292 105 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 ARMC4Q5T2S8 1044 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 CBLL1Q75N03 491 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 SKA3Q8IX90 412 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 OR4K5Q8NGD3 323 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 MCHR2Q969V1 340 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 MRPL24Q96A35 216 aaKnown RBP13.58□□□□□ -0.24
HDAC4-213ENST00000496347 HSH2DQ96JZ2 352 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 TNFRSF13CQ96RJ3 184 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 VRK1Q99986 396 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-213ENST00000496347 FNDC11Q9BVV2 318 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 ANKRD19PQ9H560 264 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 DYNLRB1Q9NP97 96 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 CMAHPQ9Y471 501 aa13.58□□□□□ -0.24
HDAC4-213ENST00000496347 MALRD1Q5VYJ5 2156 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 LOC390937A0A1W2PQ73 354 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 VWC2LB2RUY7 222 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 CRLF1O75462 422 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 SERPINA1P01009 418 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 SAGP10523 405 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-213ENST00000496347 IFI30P13284 250 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 ACADSP16219 412 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 USF1P22415 310 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-213ENST00000496347 GLRXP35754 106 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 RUNX1T1Q06455 604 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 FXNQ16595 210 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 C6orf52Q5T4I8 152 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 GKAP1Q5VSY0 366 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-213ENST00000496347 TMEM53Q6P2H8 277 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 ZNF584Q8IVC4 421 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 ANKS4BQ8N8V4 417 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 FAM156AQ8NDB6 213 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 MOSPD2Q8NHP6 518 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 FNDC8Q8TC99 324 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 NEU4Q8WWR8 484 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-213ENST00000496347 ACOT11Q8WXI4 607 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-213ENST00000496347 FAM162AQ96A26 154 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 ZNF347Q96SE7 839 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 DOK1Q99704 481 aa13.57□□□□□ -0.24
HDAC4-213ENST00000496347 ELAC2Q9BQ52 826 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms