RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 HPXP02790 462 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 F13BP05160 661 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 TACSTD2P09758 323 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 TCN1P20061 433 aaPredicted RBP10□□□□□ -0.81
VTI1A-208ENST00000494728 KLF10Q13118 480 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 PIN1Q13526 163 aaPredicted RBP10□□□□□ -0.81
VTI1A-208ENST00000494728 CCNIQ14094 377 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 IQCCQ4KMZ1 466 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 DEF8Q6ZN54 512 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 NANOGNBQ7Z5D8 188 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 ZNF786Q8N393 782 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 NOXO1Q8NFA2 376 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 OR4K5Q8NGD3 323 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 MOSPD2Q8NHP6 518 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 ASB10Q8WXI3 467 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 ZNF566Q969W8 418 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 LRRC58Q96CX6 371 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 SLC25A44Q96H78 314 aaPredicted RBP10□□□□□ -0.81
VTI1A-208ENST00000494728 MPP4Q96JB8 637 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 ZNF583Q96ND8 569 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 TSPAN32Q96QS1 320 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 SEPHS2Q99611 448 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 SIKE1Q9BRV8 207 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 SHARPINQ9H0F6 387 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 OR51B6Q9H340 312 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 SAR1AQ9NR31 198 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 FGFR1OP2Q9NVK5 253 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 KCNS2Q9ULS6 477 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 SH3GLB1Q9Y371 365 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 CMAHPQ9Y471 501 aa10□□□□□ -0.81
VTI1A-208ENST00000494728 M0R233 179 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 MRASO14807 208 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 DHHO43323 396 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 OR6A2O95222 327 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 SLC2A10O95528 541 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 CLPTM1O96005 669 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 IFNA2P01563 188 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 QDPRP09417 244 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 TSPAN19P0C672 248 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 FAM157BP0CG42 384 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 UMPSP11172 480 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 GLRXP35754 106 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 AQP2P41181 271 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 FMODQ06828 376 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 HIST3H3Q16695 136 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 ALKBH6Q3KRA9 238 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 TMEM255AQ5JRV8 349 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 INTS11Q5TA45 600 aaKnown RBP9.99□□□□□ -0.81
VTI1A-208ENST00000494728 PIWIL3Q7Z3Z3 882 aaKnown RBP9.99□□□□□ -0.81
VTI1A-208ENST00000494728 SNX32Q86XE0 403 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 MEX3DQ86XN8 651 aaKnown RBP9.99□□□□□ -0.81
VTI1A-208ENST00000494728 SLC30A8Q8IWU4 369 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 CLDN22Q8N7P3 220 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 SYT14Q8NB59 555 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 IL17RDQ8NFM7 739 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 OR8J3Q8NGG0 315 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 SLC26A7Q8TE54 656 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 UBASH3BQ8TF42 649 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 NEU4Q8WWR8 484 aaPredicted RBP9.99□□□□□ -0.81
VTI1A-208ENST00000494728 GTF3AQ92664 365 aaKnown RBP9.99□□□□□ -0.81
VTI1A-208ENST00000494728 YIPF5Q969M3 257 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 MCHR2Q969V1 340 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 NMD3Q96D46 503 aaKnown RBP9.99□□□□□ -0.81
VTI1A-208ENST00000494728 MRPL13Q9BYD1 178 aaKnown RBP9.99□□□□□ -0.81
VTI1A-208ENST00000494728 SLC19A3Q9BZV2 496 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 ZNF446Q9NWS9 450 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 UGT2A1Q9Y4X1 527 aa9.99□□□□□ -0.81
VTI1A-208ENST00000494728 BLOC1S5-TXNDC5H3BN57 136 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 SYNGR3O43761 229 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 OR7A10O76100 309 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 TGFAP01135 160 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 MT-ND1P03886 318 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 SERPINA5P05154 406 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 MMP7P09237 267 aaPredicted RBP9.98□□□□□ -0.81
VTI1A-208ENST00000494728 NAT2P11245 290 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 SRD5A1P18405 259 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 COL8A2P25067 703 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 APEX1P27695 318 aaKnown RBP9.98□□□□□ -0.81
VTI1A-208ENST00000494728 HNRNPA0Q13151 305 aaKnown RBP9.98□□□□□ -0.81
VTI1A-208ENST00000494728 CR1LQ2VPA4 569 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 LRRC23Q53EV4 343 aaPredicted RBP9.98□□□□□ -0.81
VTI1A-208ENST00000494728 ARMC4Q5T2S8 1044 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 METTL21CQ5VZV1 264 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 C10orf82Q8WW14 230 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 NABP1Q96AH0 204 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 NARFLQ9H6Q4 476 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 ARMCX1Q9P291 453 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 LPAR3Q9UBY5 353 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 REV1Q9UBZ9 1251 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 RIMS3Q9UJD0 308 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 PKD1L1Q8TDX9 2849 aa9.98□□□□□ -0.81
VTI1A-208ENST00000494728 LOC100653049A0A140TA62 436 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 FAM220BPB1ANY3 271 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 TRMUO75648 421 aaKnown RBP9.97□□□□□ -0.81
VTI1A-208ENST00000494728 KRT34O76011 436 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 OR5F1O95221 314 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 BCL10O95999 233 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 IGHG1P01857 330 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 OR8G3PP0DMU2 310 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 CDAP32320 146 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms