RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 HIST1H1CP16403 213 aaKnown RBP9.22□□□□□ -0.93
LINC00488-201ENST00000494582 ZNF28P17035 718 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 ACTA2P62736 377 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 ACTG2P63267 376 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 PRKCZQ05513 592 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 PPP1R1AQ13522 171 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 ALG11Q2TAA5 492 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 TMEM205Q6UW68 189 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 SLC16A11Q8NCK7 471 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 NLGN2Q8NFZ4 835 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 OR4K17Q8NGC6 315 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 OR51A4Q8NGJ6 313 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 OR9A2Q8NGT5 310 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 SLC39A7Q92504 469 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 MISP3Q96FF7 219 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 SLC6A7Q99884 636 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 TGIF2Q9GZN2 237 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 CST11Q9H112 138 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 KLHL28Q9NXS3 571 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 TAS2R8Q9NYW2 309 aa9.22□□□□□ -0.93
LINC00488-201ENST00000494582 SCN5AQ14524 2016 aa9.21□□□□□ -0.93
LINC00488-201ENST00000494582 A0A1B0GVT2 93 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 A0A1W2PR48 441 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 FAM171A2A8MVW0 826 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 GPRIN2O60269 458 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 RCBTB2O95199 551 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 RAB3DO95716 219 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 INHAP05111 366 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 DCNP07585 359 aaKnown RBP9.21□□□□□ -0.94
LINC00488-201ENST00000494582 CTSLP07711 333 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 ZBTB25P24278 435 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 PMELP40967 661 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 RBP2P50120 134 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 GATMP50440 423 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 HTRA3P83110 453 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 ZNF239Q16600 458 aaKnown RBP9.21□□□□□ -0.94
LINC00488-201ENST00000494582 POM121L1PQ3SYA9 428 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 FAM111BQ6SJ93 734 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 GLB1LQ6UWU2 654 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 NUP43Q8NFH3 380 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 OR5AR1Q8NGP9 310 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 GPX8Q8TED1 209 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 DCUN1D4Q92564 292 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 TFGQ92734 400 aaPredicted RBP9.21□□□□□ -0.94
LINC00488-201ENST00000494582 CDS1Q92903 461 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 UBE2E3Q969T4 207 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 MOAP1Q96BY2 351 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 SMIM8Q96KF7 97 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 PRAP1Q96NZ9 151 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 NEU1Q99519 415 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 ELF4Q99607 663 aaPredicted RBP9.21□□□□□ -0.94
LINC00488-201ENST00000494582 CHST5Q9GZS9 411 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 PRO1933Q9H354 126 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 XKR8Q9H6D3 395 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 OPA3Q9H6K4 179 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 FN3KRPQ9HA64 309 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 PISDQ9UG56 409 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 PCYT1BQ9Y5K3 369 aaPredicted RBP9.21□□□□□ -0.94
LINC00488-201ENST00000494582 PRRC2BQ5JSZ5 2229 aaKnown RBP9.21□□□□□ -0.94
LINC00488-201ENST00000494582 LAMA2P24043 3122 aaKnown RBP9.21□□□□□ -0.94
LINC00488-201ENST00000494582 TICRRQ7Z2Z1 1910 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 NUP210LQ5VU65 1888 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 NPIPA5A0A0B4J1W7 369 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 A0A1W2PPE2 198 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 NPIPA7E9PJI5 369 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 BLOC1S5-TXNDC5H3BN57 136 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 HOXB5P09067 269 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 NPIPA8P0DM63 369 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 COX5BP10606 129 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 HOXA5P20719 270 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 PRSS3P35030 304 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 POU3F4P49335 361 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 GSK3AP49840 483 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 SPCS3P61009 180 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 OR1Q1Q15612 314 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 DUSP5Q16690 384 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 SCGB2B2Q4G0G5 96 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 EXOSC6Q5RKV6 272 aaKnown RBP9.21□□□□□ -0.94
LINC00488-201ENST00000494582 C9orf64Q5T6V5 341 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 PRAMEF8Q5VWM4 474 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 PRAMEF7Q5VXH5 474 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 RPL13AP3Q6NVV1 102 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 C22orf39Q6P5X5 142 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 TMEM64Q6YI46 380 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 Q6ZVU0 165 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 REC114Q7Z4M0 266 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 OR5K2Q8NHB8 316 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 SLC25A43Q8WUT9 341 aaPredicted RBP9.21□□□□□ -0.94
LINC00488-201ENST00000494582 PHYHIPQ92561 330 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 GLYATL1Q969I3 302 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 ZNF689Q96CS4 500 aaPredicted RBP9.21□□□□□ -0.94
LINC00488-201ENST00000494582 RAB3CQ96E17 227 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 SEH1LQ96EE3 360 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 SULT4A1Q9BR01 284 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 SOX7Q9BT81 388 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 TEX101Q9BY14 249 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 SMOC1Q9H4F8 434 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 MARCH5Q9NX47 278 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 KCNG2Q9UJ96 466 aa9.21□□□□□ -0.94
LINC00488-201ENST00000494582 KLHDC2Q9Y2U9 406 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms