RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ESRP2Q9H6T0 727 aaKnown RBP11.84□□□□□ -0.51
COL1A1-208ENST00000494334 PLEKHF2Q9H8W4 249 aa11.84□□□□□ -0.51
COL1A1-208ENST00000494334 DNAJB9Q9UBS3 223 aa11.84□□□□□ -0.51
COL1A1-208ENST00000494334 IER3IP1Q9Y5U9 82 aa11.84□□□□□ -0.51
COL1A1-208ENST00000494334 SETXQ7Z333 2677 aaKnown RBP11.83□□□□□ -0.51
COL1A1-208ENST00000494334 CELSR2Q9HCU4 2923 aa11.83□□□□□ -0.51
COL1A1-208ENST00000494334 CRYBG3Q68DQ2 2970 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 ABCA4P78363 2273 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 FBN2P35556 2912 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 TEX13CA0A0J9YWL9 993 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 ZNF503-AS2A6NEH8 195 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 A6NIZ1 184 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 ARHGEF9O43307 516 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 SLC2A10O95528 541 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 WNT11O96014 354 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 PLAUP00749 431 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 B4GALT1P15291 398 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 SDHAP31040 664 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 SLC6A6P31641 620 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 ZNF83P51522 516 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 RPS6KA3P51812 740 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 RAP1BP61224 184 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 RAP1AP62834 184 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 TUBA1BP68363 451 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 TUBA4AP68366 448 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 FMODQ06828 376 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 BSPH1Q075Z2 132 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 CD47Q08722 323 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 THEM4Q5T1C6 240 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 C10orf128Q5T292 105 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 GPR139Q6DWJ6 353 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 SLC25A47Q6Q0C1 308 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 KLHL24Q6TFL4 600 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 ZNF813Q6ZN06 617 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 ZNF620Q6ZNG0 422 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 RASSF6Q6ZTQ3 369 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 TUBA1AQ71U36 451 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 YTHDF3Q7Z739 585 aaKnown RBP11.83□□□□□ -0.52
COL1A1-208ENST00000494334 NRGNQ92686 78 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 GTPBP3Q969Y2 492 aaKnown RBP11.83□□□□□ -0.52
COL1A1-208ENST00000494334 RASD2Q96D21 266 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 SAMD8Q96LT4 415 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 ZNF570Q96NI8 536 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 RBP7Q96R05 134 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 NIPSNAP1Q9BPW8 284 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 TMEM204Q9BSN7 226 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 LIME1Q9H400 295 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 EGLN3Q9H6Z9 239 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 NTN4Q9HB63 628 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 ARMC1Q9NVT9 282 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 PDP1Q9P0J1 537 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-208ENST00000494334 MGAT4BQ9UQ53 548 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 AP4S1Q9Y587 144 aa11.83□□□□□ -0.52
COL1A1-208ENST00000494334 MAGED1Q9Y5V3 778 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-208ENST00000494334 ARRDC5A6NEK1 342 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 H7C1C5 153 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 M0R1B8 84 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 E2F6O75461 281 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 PPP1R3DO95685 299 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 TXNDC12O95881 172 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 CD3EP07766 207 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 NR2C1P13056 603 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 APEHP13798 732 aaKnown RBP11.82□□□□□ -0.52
COL1A1-208ENST00000494334 PAX7P23759 505 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 ACTR3P61158 418 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 LCN6P62502 163 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 KRR1Q13601 381 aaKnown RBP11.82□□□□□ -0.52
COL1A1-208ENST00000494334 KLHL17Q6TDP4 642 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 TMEM108Q6UXF1 575 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 ZNF704Q6ZNC4 412 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-208ENST00000494334 CCDC36Q8IYA8 594 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 HS3ST5Q8IZT8 346 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 SLC22A24Q8N4F4 322 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 FNDC8Q8TC99 324 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 NSMAFQ92636 917 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 ERMAPQ96PL5 475 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-208ENST00000494334 FEVQ99581 238 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 SMURF2Q9HAU4 748 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 TMEM38BQ9NVV0 291 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 IL20Q9NYY1 176 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 ZNF224Q9NZL3 707 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 CRNNQ9UBG3 495 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-208ENST00000494334 CDH10Q9Y6N8 788 aa11.82□□□□□ -0.52
COL1A1-208ENST00000494334 SLC22A23A1A5C7 686 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 PRSS37A4D1T9 235 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 SOCS2O14508 198 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 XKRYO14609 159 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 IMPA2O14732 288 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 ARPC3O15145 178 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 DEAF1O75398 565 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-208ENST00000494334 TP53P04637 393 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-208ENST00000494334 IGFBP1P08833 259 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-208ENST00000494334 CBR1P16152 277 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 GSTM3P21266 225 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 PRKACGP22612 351 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 PTAFRP25105 342 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 CD40P25942 277 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 CAPZA2P47755 286 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 ZNF84P51523 738 aa11.81□□□□□ -0.52
COL1A1-208ENST00000494334 COX10Q12887 443 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms