RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 SLC2A10O95528 541 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 IGHMP01871 453 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 CELA3BP08861 270 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 QDPRP09417 244 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 ACADSP16219 412 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 ACVR1BP36896 505 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 DAP3P51398 398 aaKnown RBP10.17□□□□□ -0.78
UBA3-211ENST00000493957 IST1P53990 364 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 NR1H2P55055 460 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 CLRN1P58418 232 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 SMIM11AP58511 58 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 RPL27P61353 136 aaKnown RBP10.17□□□□□ -0.78
UBA3-211ENST00000493957 DBPQ10586 325 aaPredicted RBP10.17□□□□□ -0.78
UBA3-211ENST00000493957 HIST3H3Q16695 136 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 FAM98BQ52LJ0 330 aaKnown RBP10.17□□□□□ -0.78
UBA3-211ENST00000493957 PGBD2Q6P3X8 592 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 ANKRD16Q6P6B7 361 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 PAMR1Q6UXH9 720 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 B3GLCTQ6Y288 498 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 SPATA24Q86W54 205 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 CDK20Q8IZL9 346 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 FGFBP3Q8TAT2 258 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 MCHR2Q969V1 340 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 SLCO4A1Q96BD0 722 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 NMD3Q96D46 503 aaKnown RBP10.17□□□□□ -0.78
UBA3-211ENST00000493957 BOD1Q96IK1 185 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 Q96M85 177 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 USB1Q9BQ65 265 aaKnown RBP10.17□□□□□ -0.78
UBA3-211ENST00000493957 KATNB1Q9BVA0 655 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 LRMDAQ9H2I8 198 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 ZNF224Q9NZL3 707 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 ST6GALNAC2Q9UJ37 374 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 ITGB1BP2Q9UKP3 347 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 RNF115Q9Y4L5 304 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 U3KQV3 271 aa10.17□□□□□ -0.78
UBA3-211ENST00000493957 MAP1AP78559 2803 aaPredicted RBP10.17□□□□□ -0.78
UBA3-211ENST00000493957 ARPC4-TTLL3A0A0A6YYG9 625 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 IGHV1-18A0A0C4DH31 117 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 TCRBV3S1A0A5B6 114 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 HTR3EA5X5Y0 456 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 AQP12BA6NM10 295 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 SHISA9B4DS77 424 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 ABCD4O14678 606 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 DHHO43323 396 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 ATE1O95260 518 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 IGHG1P01857 330 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 CD3EP07766 207 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 PATE4P0C8F1 98 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 RAP2AP10114 183 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 CD40P25942 277 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 HOXC12P31275 282 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 RPL4P36578 427 aaKnown RBP10.16□□□□□ -0.78
UBA3-211ENST00000493957 GSSP48637 474 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 HMGA2P52926 109 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 SH3BGRP55822 239 aaPredicted RBP10.16□□□□□ -0.78
UBA3-211ENST00000493957 PRPS1P60891 318 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 MESTQ5EB52 335 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 OR2T5Q6IEZ7 315 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 ZNF770Q6IQ21 691 aaPredicted RBP10.16□□□□□ -0.78
UBA3-211ENST00000493957 ZNF813Q6ZN06 617 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 FAM122BQ7Z309 247 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 TMEM179BQ7Z7N9 219 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 MDP1Q86V88 176 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 AQP12AQ8IXF9 295 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 OR2T29Q8NH02 315 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 MAGEE2Q8TD90 523 aaPredicted RBP10.16□□□□□ -0.78
UBA3-211ENST00000493957 AKAP1Q92667 903 aaKnown RBP eCLIP10.16□□□□□ -0.78
UBA3-211ENST00000493957 UTP4Q969X6 686 aaKnown RBP10.16□□□□□ -0.78
UBA3-211ENST00000493957 RASD2Q96D21 266 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 FOXB1Q99853 325 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 CHID1Q9BWS9 393 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 TRIM15Q9C019 465 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 ESRP2Q9H6T0 727 aaKnown RBP10.16□□□□□ -0.78
UBA3-211ENST00000493957 B3GAT2Q9NPZ5 323 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 TMCC3Q9ULS5 477 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 POFUT2Q9Y2G5 429 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 UGT2A1Q9Y4X1 527 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 MED13LQ71F56 2210 aa10.16□□□□□ -0.78
UBA3-211ENST00000493957 CELSR1Q9NYQ6 3014 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 TEX13CA0A0J9YWL9 993 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 NPIPB13A6NJU9 1138 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 NPIPB4C9JG80 1138 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 HS3ST1O14792 307 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 ATP5HO75947 161 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 NDUFB2O95178 105 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 STAMBPO95630 424 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 PPP1R3DO95685 299 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 HLA-HP01893 362 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 CD14P08571 375 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 IGFBP1P08833 259 aaPredicted RBP10.15□□□□□ -0.78
UBA3-211ENST00000493957 CD53P19397 219 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 FPR3P25089 353 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 CDAP32320 146 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 UBE2NP61088 152 aaKnown RBP10.15□□□□□ -0.78
UBA3-211ENST00000493957 CD47Q08722 323 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 C1orf94Q6P1W5 598 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 ASRGL1Q7L266 308 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 ZNF627Q7L945 461 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 FANK1Q8TC84 345 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 NSMAFQ92636 917 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms