RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 KHDRBS3O75525 346 aaKnown RBP8.72□□□□□ -1.01
NPHP3-209ENST00000493732 AKR7A3O95154 331 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 TGM6O95932 706 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 ANKRD34CP0C6C1 535 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 MSX1P28360 303 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 DAP3P51398 398 aaKnown RBP8.72□□□□□ -1.01
NPHP3-209ENST00000493732 DLX5P56178 289 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 SLC17A1Q14916 467 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 FCN2Q15485 313 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 TEX30Q5JUR7 227 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 METTL11BQ5VVY1 283 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 OLFML2AQ68BL7 652 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 KRT77Q7Z794 578 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 LRRTM1Q86UE6 522 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 OR5L2Q8NGL0 311 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 OR8K3Q8NH51 312 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 RNF128Q8TEB7 428 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 TTC9Q92623 222 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 HGDQ93099 445 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 MCHR2Q969V1 340 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 TMEM106AQ96A25 262 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 SLC25A38Q96DW6 304 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 GFI1Q99684 422 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 NRSN2Q9GZP1 204 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 TSPAN10Q9H1Z9 355 aaPredicted RBP8.72□□□□□ -1.01
NPHP3-209ENST00000493732 OR5V1Q9UGF6 321 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 PPIEQ9UNP9 301 aaKnown RBP8.72□□□□□ -1.01
NPHP3-209ENST00000493732 KLHDC2Q9Y2U9 406 aa8.72□□□□□ -1.01
NPHP3-209ENST00000493732 SPTBP11277 2137 aa8.71□□□□□ -1.01
NPHP3-209ENST00000493732 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 ANKRD20A5PA0PJZ0 165 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 CDC14CA4D256 554 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 MEGF11A6BM72 1044 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 PRR32B1ATL7 298 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 C11orf98E9PRG8 122 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 ZNF208O43345 1280 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 XRCC3O43542 346 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 ALX3O95076 343 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 C4BPBP20851 252 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 CSF2RBP32927 897 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 RIDAP52758 137 aaKnown RBP8.71□□□□□ -1.02
NPHP3-209ENST00000493732 CFHR1Q03591 330 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 SSBP1Q04837 148 aaKnown RBP8.71□□□□□ -1.02
NPHP3-209ENST00000493732 TOMM34Q15785 309 aaPredicted RBP8.71□□□□□ -1.02
NPHP3-209ENST00000493732 BTBD16Q32M84 506 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 POMZP3Q6PJE2 187 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 DEGS2Q6QHC5 323 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 TMPRSS12Q86WS5 348 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 SLC25A45Q8N413 288 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 MFSD8Q8NHS3 518 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 STT3BQ8TCJ2 826 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 DUSP19Q8WTR2 217 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 TSEN15Q8WW01 171 aaKnown RBP8.71□□□□□ -1.02
NPHP3-209ENST00000493732 HSD17B8Q92506 261 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 NXPE2Q96DL1 559 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 IER2Q9BTL4 223 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 CCDC86Q9H6F5 360 aaKnown RBP8.71□□□□□ -1.02
NPHP3-209ENST00000493732 ELOVL3Q9HB03 270 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 GPN1Q9HCN4 374 aaPredicted RBP8.71□□□□□ -1.02
NPHP3-209ENST00000493732 HRASLSQ9HDD0 168 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 SDHAF3Q9NRP4 125 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 PLSCR3Q9NRY6 295 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 ZNF222Q9UK12 451 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 FBXL3Q9UKT7 428 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 KNL1Q8NG31 2342 aa8.71□□□□□ -1.02
NPHP3-209ENST00000493732 MEIKINA0A087WXM9 373 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 IGLV1-36A0A0B4J1U3 117 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 A0A1B0GUH1 482 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SLC22A23A1A5C7 686 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 H7C1C5 153 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 FABP7O15540 132 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SSNA1O43805 119 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SLC16A7O60669 478 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 RBBP9O75884 186 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 MT-ND4P03905 459 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 HEXBP07686 556 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SYPP08247 313 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SULT1A3P0DMM9 295 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SULT1A4P0DMN0 295 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 CXCL12P48061 93 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SOX2P48431 317 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 PTH2RP49190 550 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 LCN6P62502 163 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 MEP1BQ16820 701 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 COL28A1Q2UY09 1125 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 C1orf189Q5VU69 101 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 GLT8D1Q68CQ7 371 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 DNM1P46Q6ZS02 220 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 PRSS45Q7RTY3 260 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SIX5Q8N196 739 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 FAM109AQ8N4B1 249 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 OR52I2Q8NH67 350 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 ZNF431Q8TF32 576 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-209ENST00000493732 GIMAP1Q8WWP7 306 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 DACT3Q96B18 629 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-209ENST00000493732 CLDN23Q96B33 292 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 DDIT4LQ96D03 193 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 ELF4Q99607 663 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SMAD5Q99717 465 aaKnown RBP8.7□□□□□ -1.02
NPHP3-209ENST00000493732 POTEKPQ9BYX7 375 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms