RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 H7C417 338 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 J3KTA2 159 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 NME4O00746 187 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 GSTA4O15217 222 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 SLC22A2O15244 555 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 CCDC22O60826 627 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 OR7A10O76100 309 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 OR5F1O95221 314 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 ZNF682O95780 498 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 BCL10O95999 233 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 ARR3P36575 388 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 PTDSS1P48651 473 aaKnown RBP9.23□□□□□ -0.93
COL6A3-214ENST00000493608 SLC7A2P52569 658 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 GYS2P54840 703 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 RUNX1T1Q06455 604 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 RPL18Q07020 188 aaKnown RBP9.23□□□□□ -0.93
COL6A3-214ENST00000493608 KRT80Q6KB66 452 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 LRFN4Q6PJG9 635 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 CLEC2AQ6UVW9 174 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 ZCCHC24Q8N2G6 241 aaKnown RBP9.23□□□□□ -0.93
COL6A3-214ENST00000493608 ANKS4BQ8N8V4 417 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 SYT14Q8NB59 555 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 OR10H5Q8NGA6 315 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 MOSPD2Q8NHP6 518 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 TMEM54Q969K7 222 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 ZNF566Q969W8 418 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 SORCS2Q96PQ0 1159 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 ZNF347Q96SE7 839 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 FOXB1Q99853 325 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 SLC19A3Q9BZV2 496 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 ZNF224Q9NZL3 707 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 A4GNTQ9UNA3 340 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 JMJD1CQ15652 2540 aa9.23□□□□□ -0.93
COL6A3-214ENST00000493608 SH3PXD2BA1X283 911 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 MCIDASD6RGH6 385 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 CXCR6O00574 342 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 QDPRP09417 244 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 PGA4P0DJD7 388 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 PGA3P0DJD8 388 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 NCK1P16333 377 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 PAX7P23759 505 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 RBM34P42696 430 aaKnown RBP9.22□□□□□ -0.93
COL6A3-214ENST00000493608 GIPRP48546 466 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 GSK3BP49841 420 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 NUDT2P50583 147 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 EFNA4P52798 201 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 CLRN1P58418 232 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 RAB1AP62820 205 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 PPP2R2BQ00005 443 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 DAG1Q14118 895 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 RAB39AQ14964 217 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 CARTPTQ16568 116 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 GSG1Q2KHT4 349 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 C3orf36Q3SXR2 165 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 SPATA21Q7Z572 469 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 SKA3Q8IX90 412 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 CCDC36Q8IYA8 594 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 SLC22A24Q8N4F4 322 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 FAM169BQ8N8A8 192 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 OR4F15Q8NGB8 312 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 FAM168AQ92567 244 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 SLC25A44Q96H78 314 aaPredicted RBP9.22□□□□□ -0.93
COL6A3-214ENST00000493608 ZNF75AQ96N20 296 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 SH3GL3Q99963 347 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 EFCAB1Q9HAE3 211 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 INIPQ9NRY2 104 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 MED31Q9Y3C7 131 aa9.22□□□□□ -0.93
COL6A3-214ENST00000493608 A0A1W2PRG6 482 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 TMEM129A0AVI4 362 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 B9A039 149 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 J3QW42 95 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 hCG_2039718K7EN88 272 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 FFAR1O14842 300 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 DHHO43323 396 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 ATP8B1O43520 1251 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 TRMUO75648 421 aaKnown RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 SERPINA1P01009 418 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 TP53P04637 393 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 IFI30P13284 250 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF14P17017 642 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 NPR2P20594 1047 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 MAKP20794 623 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 PSME3P61289 254 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 SNRPD2P62316 118 aaKnown RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 ST3GAL3Q11203 375 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 SNTB2Q13425 540 aaKnown RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 MSMPQ1L6U9 139 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 KRTAP21-3Q3LHN1 58 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 C8orf82Q6P1X6 216 aaPredicted RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 TBPL2Q6SJ96 375 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 FKBP9P1Q75LS8 142 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF627Q7L945 461 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 PIWIL3Q7Z3Z3 882 aaKnown RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 ARPINQ7Z6K5 226 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 PRIMA1Q86XR5 153 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 SVOPLQ8N434 492 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 RBM15BQ8NDT2 890 aaKnown RBP9.21□□□□□ -0.94
COL6A3-214ENST00000493608 NUP37Q8NFH4 326 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 WFDC12Q8WWY7 111 aa9.21□□□□□ -0.94
COL6A3-214ENST00000493608 LZICQ8WZA0 190 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms