RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 HSPB2A8KAH6 182 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 PDCD5O14737 125 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 LANCL1O43813 399 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 TECTAO75443 2155 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 ITGA10O75578 1167 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 IMPDH2P12268 514 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 ZNF41P51814 821 aaPredicted RBP18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 HSPB2Q16082 182 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 BTBD16Q32M84 506 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 PLPPR5Q32ZL2 321 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 Q499Y3 187 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 PYHIN1Q6K0P9 492 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 H1FNTQ75WM6 255 aaPredicted RBP18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 NSMAFQ92636 917 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 SPACA9Q96E40 222 aaPredicted RBP18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 HDHD2Q9H0R4 259 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 SDHAF3Q9NRP4 125 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 SPATA2Q9UM82 520 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 CLEC4AQ9UMR7 237 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 EFNA2O43921 213 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 CCNKO75909 580 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 KLK3P07288 261 aaPredicted RBP18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 UMODP07911 640 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 MC2RQ01718 297 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 ZNF57Q68EA5 555 aaPredicted RBP18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 ZNF248Q8NDW4 579 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 DUSP18Q8NEJ0 188 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 POC1BQ8TC44 478 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 LGALS14Q8TCE9 139 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 ASB10Q8WXI3 467 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 MR1Q95460 341 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 RFT1Q96AA3 541 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 MRGPRX4Q96LA9 322 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 OR8B4Q96RC9 309 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 THAP7Q9BT49 309 aaPredicted RBP18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 CHST11Q9NPF2 352 aa18.97■□□□□ 0.63
CCDC88B-208ENST00000492980 SYPP08247 313 aa18.96■□□□□ 0.63
CCDC88B-208ENST00000492980 SLC35D2Q76EJ3 337 aa18.96■□□□□ 0.63
CCDC88B-208ENST00000492980 GLCCI1Q86VQ1 547 aa18.96■□□□□ 0.63
CCDC88B-208ENST00000492980 PRSS35Q8N3Z0 413 aa18.96■□□□□ 0.63
CCDC88B-208ENST00000492980 FRMD6Q96NE9 622 aa18.96■□□□□ 0.63
CCDC88B-208ENST00000492980 A0A0B4J293 547 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 A6NIZ1 184 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 MAPK3P27361 379 aaPredicted RBP18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 RAP1BP61224 184 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 RAP1AP62834 184 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 ASB17Q8WXJ9 295 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 POTEKPQ9BYX7 375 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 SMOC1Q9H4F8 434 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 WDR87Q6ZQQ6 2873 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 IGHV1-45A0A0A0MS14 117 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 LIPT2A6NK58 231 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 TMEM212A6NML5 194 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 IFITM5A6NNB3 132 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 H3BML4 177 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 AIPO00170 330 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 SLC43A1O75387 559 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 CELA2AP08217 269 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 SPARCP09486 303 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 IFNGR1P15260 489 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 CRABP1P29762 137 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 MAP2K6P52564 334 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 TLE3Q04726 772 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 SLC17A1Q14916 467 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 INPP5JQ15735 1006 aaPredicted RBP18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 MEP1BQ16820 701 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 HES5Q5TA89 166 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 SLC18B1Q6NT16 456 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 PLET1Q6UQ28 207 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 LRRN1Q6UXK5 716 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 WDFY1Q8IWB7 410 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 OR2M3Q8NG83 312 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 OR6F1Q8NGZ6 308 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 ZNF671Q8TAW3 534 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 C4orf45Q96LM5 186 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 ULBP3Q9BZM4 244 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 ELOVL3Q9HB03 270 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 ALKBH4Q9NXW9 302 aa18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 PTRH2Q9Y3E5 179 aaKnown RBP18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 PCDHGA9Q9Y5G4 932 aaKnown RBP18.95■□□□□ 0.62
CCDC88B-208ENST00000492980 TEX51A0A1B0GUA7 166 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 NPIPB13A6NJU9 1138 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 NPIPB4C9JG80 1138 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 NPIPA5E9PKD4 350 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 EEF1E1O43324 174 aaKnown RBP18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 ZNF254O75437 659 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 KLF7O75840 302 aaPredicted RBP18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 KIR3DL2P43630 455 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 SOX2P48431 317 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 DAP3P51398 398 aaKnown RBP18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 ADAM8P78325 824 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 LPAL2Q16609 132 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 FDX2Q6P4F2 183 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 ZNF433Q8N7K0 673 aaPredicted RBP18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 ZNF676Q8N7Q3 588 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 TMEM105Q8N8V8 129 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 DCBLD2Q96PD2 775 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 COMMD4Q9H0A8 199 aa18.94■□□□□ 0.62
CCDC88B-208ENST00000492980 NPIPA1Q9UND3 350 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms