RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 GSTM3P21266 225 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 PAX7P23759 505 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 SDHAP31040 664 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 FXYD6P3P58550 94 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 TUBA1BP68363 451 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 TUBA4AP68366 448 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 BSPH1Q075Z2 132 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 HIST3H3Q16695 136 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 THEM4Q5T1C6 240 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 TMEM108Q6UXF1 575 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 TUBA1AQ71U36 451 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 ZNF519Q8TB69 540 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 FNDC8Q8TC99 324 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 SAMD8Q96LT4 415 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 ERMAPQ96PL5 475 aaPredicted RBP12.22□□□□□ -0.45
CCM2-217ENST00000492883 GPX7Q96SL4 187 aaPredicted RBP12.22□□□□□ -0.45
CCM2-217ENST00000492883 IFT27Q9BW83 186 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 NELFAQ9H3P2 528 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 NPAP1Q9NZP6 1156 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 PDP1Q9P0J1 537 aaPredicted RBP12.22□□□□□ -0.45
CCM2-217ENST00000492883 EDARQ9UNE0 448 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 CACNA1CQ13936 2221 aa12.22□□□□□ -0.45
CCM2-217ENST00000492883 TEX13CA0A0J9YWL9 993 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 H7C1C5 153 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 SOCS2O14508 198 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 ENTPD5O75356 428 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 FARS2O95363 451 aaKnown RBP12.21□□□□□ -0.45
CCM2-217ENST00000492883 SLC2A10O95528 541 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 OR8G3PP0DMU2 310 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 CD79AP11912 226 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 PTAFRP25105 342 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 LOXP28300 417 aaPredicted RBP12.21□□□□□ -0.45
CCM2-217ENST00000492883 NOS3P29474 1203 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 GUCA1AP43080 201 aaPredicted RBP12.21□□□□□ -0.45
CCM2-217ENST00000492883 LCN6P62502 163 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 RPL13AP3Q6NVV1 102 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 SEZ6L2Q6UXD5 910 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 ZNF704Q6ZNC4 412 aaPredicted RBP12.21□□□□□ -0.45
CCM2-217ENST00000492883 ZNF620Q6ZNG0 422 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 RASSF6Q6ZTQ3 369 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 ZNF627Q7L945 461 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 FAM122BQ7Z309 247 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 TMEM179BQ7Z7N9 219 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 CLDN22Q8N7P3 220 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 OR52L1Q8NGH7 329 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 NRGNQ92686 78 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 RASD2Q96D21 266 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 RAB3IPQ96QF0 476 aaPredicted RBP12.21□□□□□ -0.45
CCM2-217ENST00000492883 FEVQ99581 238 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 DGCR6LQ9BY27 220 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 EGLN3Q9H6Z9 239 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 ARMC1Q9NVT9 282 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 TMEM38BQ9NVV0 291 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 RNF115Q9Y4L5 304 aa12.21□□□□□ -0.45
CCM2-217ENST00000492883 HECTD1Q9ULT8 2610 aa12.21□□□□□ -0.46
CCM2-217ENST00000492883 A0A1W2PPR1 153 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 PRSS37A4D1T9 235 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 IMPA2O14732 288 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 AHCYL1O43865 530 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 PLAUP00749 431 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 HLA-HP01893 362 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 APEHP13798 732 aaKnown RBP12.2□□□□□ -0.46
CCM2-217ENST00000492883 CBR1P16152 277 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 PRKACGP22612 351 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 FASP25445 335 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 CD40P25942 277 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 ACTR3P61158 418 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 FMODQ06828 376 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 PIGFQ07326 219 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 COX10Q12887 443 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 KRR1Q13601 381 aaKnown RBP12.2□□□□□ -0.46
CCM2-217ENST00000492883 KPNB1Q14974 876 aaKnown RBP12.2□□□□□ -0.46
CCM2-217ENST00000492883 MESTQ5EB52 335 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 CLEC12AQ5QGZ9 265 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 C10orf128Q5T292 105 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 SLC25A47Q6Q0C1 308 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 YTHDF3Q7Z739 585 aaKnown RBP12.2□□□□□ -0.46
CCM2-217ENST00000492883 SKA3Q8IX90 412 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 DEPDC4Q8N2C3 294 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 SLC22A24Q8N4F4 322 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 NANOS1Q8WY41 292 aaKnown RBP12.2□□□□□ -0.46
CCM2-217ENST00000492883 NMD3Q96D46 503 aaKnown RBP12.2□□□□□ -0.46
CCM2-217ENST00000492883 DUS3LQ96G46 650 aaKnown RBP12.2□□□□□ -0.46
CCM2-217ENST00000492883 RADILQ96JH8 1075 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 BDH2Q9BUT1 245 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 PLEKHF2Q9H8W4 249 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 UBTD1Q9HAC8 227 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 ZNF556Q9HAH1 456 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 SMURF2Q9HAU4 748 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 MOV10Q9HCE1 1003 aaKnown RBP12.2□□□□□ -0.46
CCM2-217ENST00000492883 IL20Q9NYY1 176 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 CDH10Q9Y6N8 788 aa12.2□□□□□ -0.46
CCM2-217ENST00000492883 SPTAN1Q13813 2472 aaKnown RBP12.2□□□□□ -0.46
CCM2-217ENST00000492883 IGKV1D-43A0A0B4J1Z2 117 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 SLC22A23A1A5C7 686 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 ARRDC5A6NEK1 342 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 ABCD4O14678 606 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 ARPC3O15145 178 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 SOX14O95416 240 aa12.19□□□□□ -0.46
CCM2-217ENST00000492883 TXNDC12O95881 172 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms