RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 TRIM15Q9C019 465 aa9.29□□□□□ -0.92
CDC42SE1-206ENST00000492796 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
CDC42SE1-206ENST00000492796 FBXL3Q9UKT7 428 aa9.29□□□□□ -0.92
CDC42SE1-206ENST00000492796 AURKCQ9UQB9 309 aa9.29□□□□□ -0.92
CDC42SE1-206ENST00000492796 LAMP3Q9UQV4 416 aa9.29□□□□□ -0.92
CDC42SE1-206ENST00000492796 SH3PXD2BA1X283 911 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 A6NIZ1 184 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 GYG2O15488 501 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 ARHGEF9O43307 516 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 MGRN1O60291 552 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 KRT36O76013 467 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 NDUFB2O95178 105 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 FARS2O95363 451 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 CRYAAP02489 173 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 QDPRP09417 244 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 HOXB6P17509 224 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 RRM2P31350 389 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 IFNGR2P38484 337 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 RIPPLY3P57055 190 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 RAP1BP61224 184 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 RAP1AP62834 184 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 MS4A2Q01362 244 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 RUNX1T1Q06455 604 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 TRAP1Q12931 704 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 TOP3AQ13472 1001 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 FHL1Q13642 323 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 SEC23BQ15437 767 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 GSG1Q2KHT4 349 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 SHEQ5VZ18 495 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 ZNF544Q6NX49 715 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 LRFN4Q6PJG9 635 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 DPPA2Q7Z7J5 298 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 DTX2Q86UW9 622 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 MEX3DQ86XN8 651 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 SLC22A24Q8N4F4 322 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 SYT14Q8NB59 555 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 IL17RDQ8NFM7 739 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 HDAC2Q92769 488 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 NEUROG1Q92886 237 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 MCHR2Q969V1 340 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 CCDC124Q96CT7 223 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 RSRC1Q96IZ7 334 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 LRGUKQ96M69 825 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 TSPAN32Q96QS1 320 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 TNFRSF13CQ96RJ3 184 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 GPX7Q96SL4 187 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 KCNK17Q96T54 332 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 DHRS9Q9BPW9 319 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 THTPAQ9BU02 230 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 ZNF701Q9NV72 531 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 TMEM38BQ9NVV0 291 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 B3GNT2Q9NY97 397 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 ZNF346Q9UL40 294 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 TMCC3Q9ULS5 477 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 SIGLEC7Q9Y286 467 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 PRRC2AP48634 2157 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 AKAP6Q13023 2319 aa9.28□□□□□ -0.92
CDC42SE1-206ENST00000492796 ZNF503-AS2A6NEH8 195 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 UNC119BA6NIH7 251 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 E7EQL1 145 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 ATP6V1G2-DDX39BF2Z307 99 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 OVOL3O00110 214 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 AHCYL1O43865 530 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 OR10H3O60404 316 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 RAB36O95755 333 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 HLA-HP01893 362 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 SOD3P08294 240 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 CD14P08571 375 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 CECR9P0C854 216 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 OR8G3PP0DMU2 310 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 TTKP33981 857 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 RPL4P36578 427 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 ACVR1BP36896 505 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 PTH2RP49190 550 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 NKX6-1P78426 367 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 NAAAQ02083 359 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 CHRNB3Q05901 458 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 CD47Q08722 323 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 GK3PQ14409 553 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 PGGHGQ32M88 737 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 FAM98BQ52LJ0 330 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 THEM4Q5T1C6 240 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 AGAP6Q5VW22 663 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 PRSS57Q6UWY2 283 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 B3GLCTQ6Y288 498 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 MDP1Q86V88 176 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 IGFN1Q86VF2 1251 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 TGIF2LYQ8IUE0 185 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 LINC00471Q8N535 108 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 ARIH2OSQ8N7S6 290 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 ZNF519Q8TB69 540 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 NMD3Q96D46 503 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 CLPTM1LQ96KA5 538 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 RBP7Q96R05 134 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 BTBD10Q9BSF8 475 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 TRAF4Q9BUZ4 470 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 ZNF224Q9NZL3 707 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 GRHPRQ9UBQ7 328 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 MOKQ9UQ07 419 aa9.27□□□□□ -0.93
CDC42SE1-206ENST00000492796 ATP23Q9Y6H3 246 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms