RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 SLCO1C1Q9NYB5 712 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 ABRACLQ9P1F3 81 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 MRPS17Q9Y2R5 130 aaKnown RBP11.63□□□□□ -0.55
PRAME-213ENST00000492657 PCDHGA9Q9Y5G4 932 aaKnown RBP11.63□□□□□ -0.55
PRAME-213ENST00000492657 KIF26BQ2KJY2 2108 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 ZNF354AO60765 605 aaPredicted RBP11.63□□□□□ -0.55
PRAME-213ENST00000492657 RGS11O94810 467 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 DCNP07585 359 aaKnown RBP11.63□□□□□ -0.55
PRAME-213ENST00000492657 ANKRD34CP0C6C1 535 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 M6PRP20645 277 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 STOMP27105 288 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 AANATQ16613 207 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 FCRLAQ7L513 359 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 KCTD20Q7Z5Y7 419 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 KDM8Q8N371 416 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 DNAAF1Q8NEP3 725 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 OR1N1Q8NGS0 311 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 THEM6Q8WUY1 208 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 TTC9Q92623 222 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 ATOH1Q92858 354 aaPredicted RBP11.63□□□□□ -0.55
PRAME-213ENST00000492657 ZNF501Q96CX3 271 aaPredicted RBP11.63□□□□□ -0.55
PRAME-213ENST00000492657 CCNL2Q96S94 520 aaPredicted RBP11.63□□□□□ -0.55
PRAME-213ENST00000492657 HEXA-AS1Q9H8Q6 139 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 ELF5Q9UKW6 265 aaPredicted RBP11.63□□□□□ -0.55
PRAME-213ENST00000492657 SPATA2Q9UM82 520 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 SLC6A5Q9Y345 797 aa11.63□□□□□ -0.55
PRAME-213ENST00000492657 A0A1B0GX78 115 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 ALG1L2C9J202 215 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 GPRIN2O60269 458 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 ABHD16AO95870 558 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 PTHLHP12272 177 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 APEHP13798 732 aaKnown RBP11.62□□□□□ -0.55
PRAME-213ENST00000492657 GLB1P16278 677 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 NAGAP17050 411 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 PRKACAP17612 351 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 CENPAP49450 140 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 HSF2Q03933 536 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 ETFDHQ16134 617 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 CDC20BQ86Y33 519 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 SLC38A9Q8NBW4 561 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 OR8K3Q8NH51 312 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 RPS4Y2Q8TD47 263 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 PTDSS2Q9BVG9 487 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 CHIAQ9BZP6 476 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 GHITMQ9H3K2 345 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 COPS7AQ9UBW8 275 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 LGALS8O00214 317 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 MT-ND4P03905 459 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 GP1BBP13224 206 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 SLC6A8P48029 635 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 AFF3P51826 1226 aaKnown RBP11.62□□□□□ -0.55
PRAME-213ENST00000492657 TAGLNQ01995 201 aaKnown RBP11.62□□□□□ -0.55
PRAME-213ENST00000492657 ALKBH1Q13686 389 aaKnown RBP11.62□□□□□ -0.55
PRAME-213ENST00000492657 LGALSLQ3ZCW2 172 aaPredicted RBP11.62□□□□□ -0.55
PRAME-213ENST00000492657 SLC29A4Q7RTT9 530 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 OR51A4Q8NGJ6 313 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 SCMH1Q96GD3 660 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 LINC00052Q96N35 136 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 OR51J1Q9H342 316 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 FSCN3Q9NQT6 498 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 KCNG2Q9UJ96 466 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 LAMP5Q9UJQ1 280 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 MOKQ9UQ07 419 aa11.62□□□□□ -0.55
PRAME-213ENST00000492657 TMED7-TICAM2A0A0A6YYA0 188 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 IFITM5A6NNB3 132 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 RAD1O60671 282 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 PEX14O75381 377 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 UBL3O95164 117 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 IGF2P01344 180 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 CD1AP06126 327 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 CTRB1P17538 263 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 ADRA2CP18825 462 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 IL11P20809 199 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 DCAF7P61962 342 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 RPS15P62841 145 aaKnown RBP11.61□□□□□ -0.55
PRAME-213ENST00000492657 SHBQ15464 509 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 CTRB2Q6GPI1 263 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 FAM199XQ6PEV8 388 aaPredicted RBP11.61□□□□□ -0.55
PRAME-213ENST00000492657 TSSK4Q6SA08 328 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 ZNF574Q6ZN55 896 aaPredicted RBP11.61□□□□□ -0.55
PRAME-213ENST00000492657 CFAP77Q6ZQR2 320 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 SLC35D2Q76EJ3 337 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 COX15Q7KZN9 410 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 ADGRG3Q86Y34 549 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 OR2T4Q8NH00 348 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 FBXW5Q969U6 566 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 PPP1R14AQ96A00 147 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 CCDC74AQ96AQ1 378 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 SLC25A38Q96DW6 304 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 WDR89Q96FK6 387 aaPredicted RBP11.61□□□□□ -0.55
PRAME-213ENST00000492657 MRPL48Q96GC5 212 aaKnown RBP11.61□□□□□ -0.55
PRAME-213ENST00000492657 PCED1AQ9H1Q7 454 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 DUSP15Q9H1R2 295 aaPredicted RBP11.61□□□□□ -0.55
PRAME-213ENST00000492657 NUP50Q9UKX7 468 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 TMED7Q9Y3B3 224 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 WDFY4Q6ZS81 3184 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 NUP210LQ5VU65 1888 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 TRAV36DV7A0A075B6V5 113 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 RPS10-NUDT3A0A1W2PQS6 291 aa11.61□□□□□ -0.55
PRAME-213ENST00000492657 SUSD5O60279 629 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms