RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 EMX2Q04743 252 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 GLO1Q04760 184 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 MERTKQ12866 999 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 PDE7AQ13946 482 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 LASP1Q14847 261 aaKnown RBP4.45□□□□□ -1.7
SEC13-219ENST00000492602 DPY19L1Q2PZI1 675 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 FAM153CQ494X1 144 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 TMEM155Q4W5P6 130 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 KLHL26Q53HC5 615 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 HHATQ5VTY9 493 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 IL23RQ5VWK5 629 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 PRAMEF8Q5VWM4 474 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 PRAMEF7Q5VXH5 474 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 CDC73Q6P1J9 531 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 EMBQ6PCB8 327 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 VASH1Q7L8A9 365 aaPredicted RBP4.45□□□□□ -1.7
SEC13-219ENST00000492602 C4orf33Q8N1A6 199 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 ARFGAP2Q8N6H7 521 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 ZIC4Q8N9L1 334 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 CPEB3Q8NE35 698 aaKnown RBP4.45□□□□□ -1.7
SEC13-219ENST00000492602 OR4A15Q8NGL6 344 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 CLHC1Q8NHS4 586 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 SYNPRQ8TBG9 265 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 AGR3Q8TD06 166 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 SFXN5Q8TD22 340 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 TWIST2Q8WVJ9 160 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 XAGE5Q8WWM1 108 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 DDIT4LQ96D03 193 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 APOPT1Q96IL0 206 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 PAIP2Q9BPZ3 127 aaKnown RBP4.45□□□□□ -1.7
SEC13-219ENST00000492602 NUDT16L1Q9BRJ7 211 aaKnown RBP4.45□□□□□ -1.7
SEC13-219ENST00000492602 MTHFD2LQ9H903 347 aaPredicted RBP4.45□□□□□ -1.7
SEC13-219ENST00000492602 SLCO1C1Q9NYB5 712 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 CALML5Q9NZT1 146 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 SELENONQ9NZV5 590 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 EMCNQ9ULC0 261 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 SLC35A3Q9Y2D2 325 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 FAM96BQ9Y3D0 163 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 LSM4Q9Y4Z0 139 aaKnown RBP4.45□□□□□ -1.7
SEC13-219ENST00000492602 DNAJC15Q9Y5T4 150 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 KCNE3Q9Y6H6 103 aa4.45□□□□□ -1.7
SEC13-219ENST00000492602 IGLV3-9A0A075B6K5 115 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 A0A1B0GW55 424 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 CEACAM18A8MTB9 384 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 ETV2O00321 342 aaPredicted RBP4.44□□□□□ -1.7
SEC13-219ENST00000492602 P2RY10O00398 339 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 RNASET2O00584 256 aaKnown RBP4.44□□□□□ -1.7
SEC13-219ENST00000492602 LSM1O15116 133 aaKnown RBP4.44□□□□□ -1.7
SEC13-219ENST00000492602 SLC25A17O43808 307 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 ANP32DO95626 131 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 IGHV1-46P01743 117 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 HLA-HP01893 362 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 C1QCP02747 245 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 WNT2P09544 360 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 DUX4L2P0CJ85 424 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 DUX4L3P0CJ86 424 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 DUX4L5P0CJ88 424 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 DUX4L6P0CJ89 424 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 DUX4L7P0CJ90 424 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 CD79AP11912 226 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 SDC1P18827 310 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 DRD4P21917 467 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 CXCR1P25024 350 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 LSP1P33241 339 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 GATA4P43694 442 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 RPL14P50914 215 aaKnown RBP4.44□□□□□ -1.7
SEC13-219ENST00000492602 ZNF81P51508 661 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 SH3BGRP55822 239 aaPredicted RBP4.44□□□□□ -1.7
SEC13-219ENST00000492602 CLDN8P56748 225 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 SESN3P58005 492 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 BTG1P62324 171 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 SLC35A1P78382 337 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 H3F3AP84243 136 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 ROR2Q01974 943 aaKnown RBP4.44□□□□□ -1.7
SEC13-219ENST00000492602 PIGFQ07326 219 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 STX3Q13277 289 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 RAB39AQ14964 217 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 KIAA0040Q15053 153 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 GPR68Q15743 365 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 DUSP5Q16690 384 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 GSG1Q2KHT4 349 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 LINC01559Q495D7 138 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 GPAT3Q53EU6 434 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 FAM209AQ5JX71 171 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 C6orf136Q5SQH8 315 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 DCST2Q5T1A1 773 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.44□□□□□ -1.7
SEC13-219ENST00000492602 KANK2Q63ZY3 851 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 ATG16L1Q676U5 607 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 NIPAL3Q6P499 406 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 DUX4L9Q6RFH8 374 aaPredicted RBP4.44□□□□□ -1.7
SEC13-219ENST00000492602 C6orf120Q7Z4R8 191 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 HMGN2P46Q86SG4 172 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 GPAT4Q86UL3 456 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 SATL1Q86VE3 508 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 LRRC28Q86X40 367 aaPredicted RBP4.44□□□□□ -1.7
SEC13-219ENST00000492602 PDZD9Q8IXQ8 264 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 PEX5LQ8IYB4 626 aa4.44□□□□□ -1.7
SEC13-219ENST00000492602 ZNF440Q8IYI8 595 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms