RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	C1QTNF6	Q9BXI9	259 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	CADM1	Q9BY67	442 aa	Known RBP	12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	NELFA	Q9H3P2	528 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	SMURF2	Q9HAU4	748 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	GRHPR	Q9UBQ7	328 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZNF346	Q9UL40	294 aa	Known RBP	12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	POMP	Q9Y244	141 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	SIGLEC7	Q9Y286	467 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	PLEKHA6	Q9Y2H5	1048 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	AHCYL1	O43865	530 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	MGRN1	O60291	552 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	PTP4A3	O75365	173 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	ATE1	O95260	518 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	PLAU	P00749	431 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	CD14	P08571	375 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	FPR3	P25089	353 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	ACVR1B	P36896	505 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZNF133	P52736	654 aa	Predicted RBP	12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	RUNX1T1	Q06455	604 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	TOP3A	Q13472	1001 aa	Predicted RBP	12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	NRN1L	Q496H8	165 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZNF672	Q499Z4	452 aa	Predicted RBP	12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	THEM4	Q5T1C6	240 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	GPR139	Q6DWJ6	353 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	C1orf94	Q6P1W5	598 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZER1	Q7Z7L7	766 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	IGFN1	Q86VF2	1251 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	ADGRG5	Q8IZF4	528 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	ARIH2OS	Q8N7S6	290 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	SYT14	Q8NB59	555 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZNF519	Q8TB69	540 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	GNPDA2	Q8TDQ7	276 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	AKAP1	Q92667	903 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	PIGT	Q969N2	578 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	FBXW5	Q969U6	566 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	MCHR2	Q969V1	340 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	SLC38A2	Q96QD8	506 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	RBP7	Q96R05	134 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	KCNK17	Q96T54	332 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	KATNB1	Q9BVA0	655 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	CHID1	Q9BWS9	393 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	DENND2D	Q9H6A0	471 aa	Predicted RBP	12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	YY1AP1	Q9H869	796 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	REEP1	Q9H902	201 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	CRNN	Q9UBG3	495 aa	Predicted RBP	12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	LYVE1	Q9Y5Y7	322 aa		12.06	□□□□□ -0.48
PTPN7-215	ENST00000492451	XKRY	O14609	159 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	TMCC2	O75069	709 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	SEC14L2	O76054	403 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	CCNB2	O95067	398 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	FARS2	O95363	451 aa	Known RBP	12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	OR8G3P	P0DMU2	310 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	B4GALT1	P15291	398 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	CBR1	P16152	277 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	CD53	P19397	219 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	ARR3	P36575	388 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	CAPZA2	P47755	286 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	GSS	P48637	474 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	ERVK-25	P63136	954 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	CD47	Q08722	323 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	TSPAN31	Q12999	210 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	C10orf128	Q5T292	105 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	SMARCD3	Q6STE5	483 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	SLC22A25	Q6T423	547 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	DPY19L2P2	Q6ZN68	376 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	YTHDF3	Q7Z739	585 aa	Known RBP	12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	DPPA2	Q7Z7J5	298 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	SLC22A24	Q8N4F4	322 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	KBTBD8	Q8NFY9	601 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	CANT1	Q8WVQ1	401 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	HDAC2	Q92769	488 aa	Known RBP	12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	TSPAN32	Q96QS1	320 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	GPX7	Q96SL4	187 aa	Predicted RBP	12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	KCNS3	Q9BQ31	491 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	LRMDA	Q9H2I8	198 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	TMEM38B	Q9NVV0	291 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	BEX4	Q9NWD9	120 aa	Predicted RBP	12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	SLC7A8	Q9UHI5	535 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	POU2F3	Q9UKI9	436 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	FBXL3	Q9UKT7	428 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	ROS1	P08922	2347 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	HEATR1	Q9H583	2144 aa	Known RBP	12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	RAI1	Q7Z5J4	1906 aa	Predicted RBP	12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	PRRC2A	P48634	2157 aa	Known RBP	12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	CAD	P27708	2225 aa		12.05	□□□□□ -0.48
PTPN7-215	ENST00000492451	IGHV1-18	A0A0C4DH31	117 aa		12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	TCRBV3S1	A0A5B6	114 aa		12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	SHISA9	B4DS77	424 aa		12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	ARHGEF9	O43307	516 aa		12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	UBL3	O95164	117 aa		12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	CST1	P01037	141 aa		12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	IGKV3-15	P01624	115 aa		12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	IGLV1-44	P01699	117 aa		12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	CRYAA	P02489	173 aa		12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	CD79A	P11912	226 aa		12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	APEH	P13798	732 aa	Known RBP	12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZNF26	P17031	533 aa	Predicted RBP	12.04	□□□□□ -0.48
PTPN7-215	ENST00000492451	NPR2	P20594	1047 aa		12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms