RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 NRN1LQ496H8 165 aa23.46■■□□□ 1.35
SH3GL3-204ENST00000492099 CPLX4Q7Z7G2 160 aa23.46■■□□□ 1.35
SH3GL3-204ENST00000492099 DPPA2Q7Z7J5 298 aa23.46■■□□□ 1.35
SH3GL3-204ENST00000492099 SKA3Q8IX90 412 aa23.46■■□□□ 1.35
SH3GL3-204ENST00000492099 ASB10Q8WXI3 467 aa23.46■■□□□ 1.35
SH3GL3-204ENST00000492099 MS4A3Q96HJ5 214 aa23.46■■□□□ 1.35
SH3GL3-204ENST00000492099 SEPHS2Q99611 448 aa23.46■■□□□ 1.35
SH3GL3-204ENST00000492099 VRK1Q99986 396 aaPredicted RBP23.46■■□□□ 1.35
SH3GL3-204ENST00000492099 ABCD2Q9UBJ2 740 aa23.46■■□□□ 1.35
SH3GL3-204ENST00000492099 SNX13Q9Y5W8 968 aa23.46■■□□□ 1.35
SH3GL3-204ENST00000492099 NPIPB13A6NJU9 1138 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 NPIPB4C9JG80 1138 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 INAFM1C9JVW0 142 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 SERPINA1P01009 418 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 IFI30P13284 250 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 ACADSP16219 412 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 NR4A1P22736 598 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 PPOXP50336 477 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 PSME3P61289 254 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 RUNX1T1Q06455 604 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 SNTB2Q13425 540 aaKnown RBP23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 LAPTM4AQ15012 233 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 KRT80Q6KB66 452 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 NOXO1Q8NFA2 376 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 MOSPD2Q8NHP6 518 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 MCHR2Q969V1 340 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 FAM162AQ96A26 154 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 SORCS2Q96PQ0 1159 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 HIF3AQ9Y2N7 669 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 ARFGEF3Q5TH69 2177 aa23.45■■□□□ 1.34
SH3GL3-204ENST00000492099 GMNCA6NCL1 334 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 hCG_2039718K7EN88 272 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 PIP5K1CO60331 668 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 TRMUO75648 421 aaKnown RBP23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 ZNF35P13682 527 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 DRD4P21917 467 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 LSP1P33241 339 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 ZNF84P51523 738 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 TAF11Q15544 211 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 RNF113BQ8IZP6 322 aaKnown RBP23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 C10orf105Q8TEF2 133 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 HSH2DQ96JZ2 352 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 ZNF347Q96SE7 839 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 SPAG4Q9NPE6 437 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 RHCGQ9UBD6 479 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 CMAHPQ9Y471 501 aa23.44■■□□□ 1.34
SH3GL3-204ENST00000492099 J3KTA2 159 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 FFAR1O14842 300 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 MGRN1O60291 552 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 SERPINA5P05154 406 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 LOXL1Q08397 574 aaPredicted RBP23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 ALG10Q5BKT4 473 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 ARMC4Q5T2S8 1044 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 SYT14Q8NB59 555 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 DOK1Q99704 481 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 RAB1BQ9H0U4 201 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 TXNIPQ9H3M7 391 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 MYOZ1Q9NP98 299 aaPredicted RBP23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 MAN2C1Q9NTJ4 1040 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 RPS6KA6Q9UK32 745 aa23.43■■□□□ 1.34
SH3GL3-204ENST00000492099 A0A096LNT2 108 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 CD5LO43866 347 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 LY6HO94772 140 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 PATE4P0C8F1 98 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 SAGP10523 405 aaPredicted RBP23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 NR2C1P13056 603 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 PDLIM4P50479 330 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 ZNF133P52736 654 aaPredicted RBP23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 MYBPC1Q00872 1141 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 RAB39AQ14964 217 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 ANKDD1AQ495B1 522 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 CYP4Z1Q86W10 505 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 NRMQ8IXM6 262 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 OR4K5Q8NGD3 323 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 ACOT11Q8WXI4 607 aaPredicted RBP23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 TNFRSF13CQ96RJ3 184 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 SH3GL3Q99963 347 aa23.42■■□□□ 1.34
SH3GL3-204ENST00000492099 NDUFS8O00217 210 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 TLX2O43763 284 aaPredicted RBP23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 ERCC1P07992 297 aaPredicted RBP23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 NCK1P16333 377 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 LSM11P83369 360 aaKnown RBP eCLIP23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 GALK2Q01415 458 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 PRKCDQ05655 676 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 SLC36A2Q495M3 483 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 C10orf128Q5T292 105 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 TMEM53Q6P2H8 277 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 SLC16A14Q7RTX9 510 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 CDK20Q8IZL9 346 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 SVOPLQ8N434 492 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 FGFBP3Q8TAT2 258 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 RNF121Q9H920 327 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 SMURF2Q9HAU4 748 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 CR1P17927 2039 aa23.41■■□□□ 1.34
SH3GL3-204ENST00000492099 TMEM129A0AVI4 362 aa23.4■■□□□ 1.34
SH3GL3-204ENST00000492099 MAKP20794 623 aa23.4■■□□□ 1.34
SH3GL3-204ENST00000492099 FUT4P22083 530 aa23.4■■□□□ 1.34
SH3GL3-204ENST00000492099 GLRXP35754 106 aa23.4■■□□□ 1.34
SH3GL3-204ENST00000492099 EVX1P49640 407 aa23.4■■□□□ 1.34
SH3GL3-204ENST00000492099 RPS23P62266 143 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms