RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CDH15P55291 814 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 RUNX1T1Q06455 604 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 PIGFQ07326 219 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 RABL3Q5HYI8 236 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 C10orf128Q5T292 105 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 ARMC4Q5T2S8 1044 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 KRT80Q6KB66 452 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 UGT2A3Q6UWM9 527 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 C10orf53Q8N6V4 93 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 ZNF566Q969W8 418 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 THOC1Q96FV9 657 aaKnown RBP7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 SAR1AQ9NR31 198 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 KCNS2Q9ULS6 477 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 SPEF1Q9Y4P9 236 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 A0A0G2JND7 137 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 LRP5LA4QPB2 252 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 BBIP1A8MTZ0 92 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 C11orf98E9PRG8 122 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 M0R233 179 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 RNF13O43567 381 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 ICMTO60725 284 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 RP2O75695 350 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 OR7A10O76100 309 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 OR6A2O95222 327 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 BCL10O95999 233 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 TGFAP01135 160 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 IGHG1P01857 330 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 HPXP02790 462 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 HIST1H2ABP04908 130 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 QDPRP09417 244 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 PATE4P0C8F1 98 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 SRD5A1P18405 259 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 COL8A2P25067 703 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 CAPZA2P47755 286 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 PTDSS1P48651 473 aaKnown RBP7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 SEC24CP53992 1094 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 TMEM33P57088 247 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 RPS23P62266 143 aaKnown RBP7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 MRPS34P82930 218 aaKnown RBP7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 IL1RL1Q01638 556 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 RPL18Q07020 188 aaKnown RBP7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 KLF10Q13118 480 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 FHL1Q13642 323 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 RAB39AQ14964 217 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 KRTAP24-1Q3LI83 254 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 MMEL1Q495T6 779 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 CGB2Q6NT52 195 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 ERICH5Q6P6B1 374 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 DEF8Q6ZN54 512 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 HIST3H2AQ7L7L0 130 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 LRP11Q86VZ4 500 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 CARM1Q86X55 608 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 NKAIN4Q8IVV8 208 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 PAQR4Q8N4S7 273 aaPredicted RBP7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 VANGL1Q8TAA9 524 aaPredicted RBP7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 RNF217Q8TC41 542 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 C10orf82Q8WW14 230 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 ASB10Q8WXI3 467 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 HIST1H2ACQ93077 130 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 MCHR2Q969V1 340 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 C1orf198Q9H425 327 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 CHODLQ9H9P2 273 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 SMURF2Q9HAU4 748 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 C20orf141Q9NUB4 165 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 NKIRAS2Q9NYR9 191 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 MYEF2Q9P2K5 600 aaKnown RBP7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 SLC7A8Q9UHI5 535 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 RIMS3Q9UJD0 308 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 BAG5Q9UL15 447 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 SH3GLB1Q9Y371 365 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 UGT2A1Q9Y4X1 527 aa7.18□□□□□ -1.26
SMARCB1-207ENST00000491967 NBEAL1Q6ZS30 2694 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 SLC22A23A1A5C7 686 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 SH3PXD2BA1X283 911 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 SLC22A2O15244 555 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 TRMUO75648 421 aaKnown RBP7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 RAB36O95755 333 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 IFNA14P01570 189 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 ACADSP16219 412 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 FUT1P19526 365 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 FUT4P22083 530 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 ACHEP22303 614 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 KDELR2P33947 212 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 DVL1P1P54792 670 aaPredicted RBP7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 LMO4P61968 165 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 SELENOWP63302 87 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 PIN1Q13526 163 aaPredicted RBP7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 TRIP10Q15642 601 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 CR1LQ2VPA4 569 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 IQCCQ4KMZ1 466 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 FAM27BQ5VT28 67 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 REP15Q6BDI9 236 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 C8orf82Q6P1X6 216 aaPredicted RBP7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 SLC25A47Q6Q0C1 308 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 FOXL2NBQ6ZUU3 175 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 HDDC2Q7Z4H3 204 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 LINC01356Q8N9X3 169 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 LRRC75AQ8NAA5 344 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 FAM156AQ8NDB6 213 aa7.17□□□□□ -1.26
SMARCB1-207ENST00000491967 CPEB3Q8NE35 698 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms