RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LCKP06239 509 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 OR8G3PP0DMU2 310 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 BMP2P12643 396 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 BGNP21810 368 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 GATA3P23771 443 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 EPHA3P29320 983 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 RAD52P43351 418 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 CSNK1A1P48729 337 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 MMP15P51511 669 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 UCP2P55851 309 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 BIDP55957 195 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 SRSF4Q08170 494 aaKnown RBP11.19□□□□□ -0.62
USF1-206ENST00000491629 RBBP4Q09028 425 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 LRRC74AQ0VAA2 488 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 PMS2P3Q13401 168 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 RGNQ15493 299 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 MMEL1Q495T6 779 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 PXKQ7Z7A4 578 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 ZNF519Q8TB69 540 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 ARMC7Q9H6L4 198 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 SAP30LQ9HAJ7 183 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 A4GALTQ9NPC4 353 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 TMEM38BQ9NVV0 291 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 SLCO1C1Q9NYB5 712 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 RPS6KB2Q9UBS0 482 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 NBEAL2Q6ZNJ1 2754 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 PPIAL4EA0A075B759 164 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 PPIAL4CA0A0B4J2A2 164 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 A0A0B4J2E0 115 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 A0A1B0GX12 115 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 ZNF726A6NNF4 738 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 PPIAL4DF5H284 164 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 TM9SF1O15321 606 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 BIRC5O15392 142 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 MFN2O95140 757 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 SNAP29O95721 258 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 RNASE1P07998 156 aaKnown RBP11.18□□□□□ -0.62
USF1-206ENST00000491629 PPIAL4FP0DN26 164 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 MDKP21741 143 aaPredicted RBP11.18□□□□□ -0.62
USF1-206ENST00000491629 MPV17P39210 176 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 SEC61A1P61619 476 aaKnown RBP11.18□□□□□ -0.62
USF1-206ENST00000491629 FAM91A1Q658Y4 838 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 ULK3Q6PHR2 472 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 OR9I1Q8NGQ6 314 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 SNX33Q8WV41 574 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 DNAJA4Q8WW22 397 aaPredicted RBP11.18□□□□□ -0.62
USF1-206ENST00000491629 CCL17Q92583 94 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 GAL3ST1Q99999 423 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 PAIP1Q9H074 479 aaKnown RBP11.18□□□□□ -0.62
USF1-206ENST00000491629 NPHS2Q9NP85 383 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 GLTPQ9NZD2 209 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 FBXL3Q9UKT7 428 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 NUP50Q9UKX7 468 aa11.18□□□□□ -0.62
USF1-206ENST00000491629 SLC22A23A1A5C7 686 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 ZSCAN5BA6NJL1 495 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 C11orf98E9PRG8 122 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 IL6P05231 212 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 MMP7P09237 267 aaPredicted RBP11.17□□□□□ -0.62
USF1-206ENST00000491629 AHCYP23526 432 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 PRKAR1BP31321 381 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 WNT5AP41221 380 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 CDH12P55289 794 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 TEKQ02763 1124 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 BST1Q10588 318 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 BAMBIQ13145 260 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 SLC9A3R2Q15599 337 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 OR1Q1Q15612 314 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 HFEQ30201 348 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 LEG1Q6P5S2 330 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 DHRS4L2Q6PKH6 230 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 SLC35D2Q76EJ3 337 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 RETREG3Q86VR2 466 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 MSRB3Q8IXL7 192 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 ZNF101Q8IZC7 436 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 GLB1L3Q8NCI6 653 aaPredicted RBP11.17□□□□□ -0.62
USF1-206ENST00000491629 CPEB3Q8NE35 698 aaKnown RBP11.17□□□□□ -0.62
USF1-206ENST00000491629 OR4K5Q8NGD3 323 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 OR6X1Q8NH79 312 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 BBS10Q8TAM1 723 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 C11orf40Q8WZ69 217 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 GTF2H4Q92759 462 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 RAB1CQ92928 201 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 SLC47A1Q96FL8 570 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 ASPNQ9BXN1 380 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 ROPN1BQ9BZX4 212 aaPredicted RBP11.17□□□□□ -0.62
USF1-206ENST00000491629 SLITRK2Q9H156 845 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 ROPN1Q9HAT0 212 aaPredicted RBP11.17□□□□□ -0.62
USF1-206ENST00000491629 CDH20Q9HBT6 801 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 DECR2Q9NUI1 292 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 PLEK2Q9NYT0 353 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 TAS2R5Q9NYW4 299 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 UBAP1Q9NZ09 502 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 ARMCX1Q9P291 453 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 GPR160Q9UJ42 338 aa11.17□□□□□ -0.62
USF1-206ENST00000491629 PURGQ9UJV8 347 aaKnown RBP11.17□□□□□ -0.62
USF1-206ENST00000491629 POLR3KQ9Y2Y1 108 aaPredicted RBP11.17□□□□□ -0.62
USF1-206ENST00000491629 POM121CA8CG34 1229 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 DHHO43323 396 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 SPRY3O43610 288 aa11.16□□□□□ -0.62
USF1-206ENST00000491629 SLC22A3O75751 556 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms