RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 MT-ATP6P00846 226 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 PTHP01270 115 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 LCKP06239 509 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 BIDP55957 195 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 VSNL1P62760 191 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 TBC1D28Q2M2D7 210 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 SWT1Q5T5J6 900 aaKnown RBP17.57■□□□□ 0.4
CLIP2-208ENST00000491075 NXNQ6DKJ4 435 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 TMEM53Q6P2H8 277 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 RBMS3Q6XE24 437 aaKnown RBP17.57■□□□□ 0.4
CLIP2-208ENST00000491075 RETREG3Q86VR2 466 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 KRT73Q86Y46 540 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 TREML1Q86YW5 311 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 C22orf15Q8WYQ4 148 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 TMEM54Q969K7 222 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 GAL3ST1Q99999 423 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 TMEM43Q9BTV4 400 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 OR51B6Q9H340 312 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 TMEM27Q9HBJ8 222 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 SDR39U1Q9NRG7 319 aaPredicted RBP17.57■□□□□ 0.4
CLIP2-208ENST00000491075 TMEM38BQ9NVV0 291 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 GLTPQ9NZD2 209 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 OPN4Q9UHM6 478 aa17.57■□□□□ 0.4
CLIP2-208ENST00000491075 ARHGAP32A7KAX9 2087 aa17.56■□□□□ 0.4
CLIP2-208ENST00000491075 ADORA3P0DMS8 318 aa17.56■□□□□ 0.4
CLIP2-208ENST00000491075 POLR2JP52435 117 aaKnown RBP17.56■□□□□ 0.4
CLIP2-208ENST00000491075 RGS8P57771 180 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-208ENST00000491075 ERVS71-1P61550 626 aa17.56■□□□□ 0.4
CLIP2-208ENST00000491075 WDR88Q6ZMY6 472 aa17.56■□□□□ 0.4
CLIP2-208ENST00000491075 OR1J2Q8NGS2 313 aa17.56■□□□□ 0.4
CLIP2-208ENST00000491075 OR5J2Q8NH18 312 aa17.56■□□□□ 0.4
CLIP2-208ENST00000491075 OR6X1Q8NH79 312 aa17.56■□□□□ 0.4
CLIP2-208ENST00000491075 AENQ8WTP8 325 aaKnown RBP17.56■□□□□ 0.4
CLIP2-208ENST00000491075 DVL3Q92997 716 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-208ENST00000491075 SH3GL3Q99963 347 aa17.56■□□□□ 0.4
CLIP2-208ENST00000491075 PAIP1Q9H074 479 aaKnown RBP17.56■□□□□ 0.4
CLIP2-208ENST00000491075 RNF121Q9H920 327 aa17.56■□□□□ 0.4
CLIP2-208ENST00000491075 ZMAT3Q9HA38 289 aaKnown RBP17.56■□□□□ 0.4
CLIP2-208ENST00000491075 LRRN3E7EW58 273 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 C11orf98E9PRG8 122 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 ARAFP10398 606 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 CCL2P13500 99 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 DRD4P21917 467 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 UCP2P55851 309 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 OR1Q1Q15612 314 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 SLC36A2Q495M3 483 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 FAM209AQ5JX71 171 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 REEP3Q6NUK4 255 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 NFKBIDQ8NI38 313 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 GTF2H4Q92759 462 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 ZNF566Q969W8 418 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 ELMOD3Q96FG2 381 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 LRMDAQ9H2I8 198 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 CACNG2Q9Y698 323 aa17.55■□□□□ 0.4
CLIP2-208ENST00000491075 TPST1O60507 370 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 MFN2O95140 757 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 OR6A2O95222 327 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 IGHV3-13P01766 116 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 LCN2P80188 198 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 DEFA6Q01524 100 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 MPP2Q14168 576 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 TSTQ16762 297 aaKnown RBP17.54■□□□□ 0.4
CLIP2-208ENST00000491075 TREML4Q6UXN2 200 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 SLC35D2Q76EJ3 337 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 RANBP3LQ86VV4 465 aaPredicted RBP17.54■□□□□ 0.4
CLIP2-208ENST00000491075 GOLGA6L1Q8N7Z2 621 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 ICA1LQ8NDH6 482 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 BHLHE22Q8NFJ8 381 aaPredicted RBP17.54■□□□□ 0.4
CLIP2-208ENST00000491075 OR9I1Q8NGQ6 314 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 GTF3AQ92664 365 aaKnown RBP17.54■□□□□ 0.4
CLIP2-208ENST00000491075 SLC25A44Q96H78 314 aaPredicted RBP17.54■□□□□ 0.4
CLIP2-208ENST00000491075 MAELQ96JY0 434 aaKnown RBP17.54■□□□□ 0.4
CLIP2-208ENST00000491075 PAIP2Q9BPZ3 127 aaKnown RBP17.54■□□□□ 0.4
CLIP2-208ENST00000491075 EVA1AQ9H8M9 152 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 SLC13A4Q9UKG4 626 aa17.54■□□□□ 0.4
CLIP2-208ENST00000491075 PPIAL4EA0A075B759 164 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 PPIAL4CA0A0B4J2A2 164 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 IQCMA0A1B0GVH7 501 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 PRORSD1PA6NEY8 169 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 PPIAL4DF5H284 164 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 DHHO43323 396 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 ZNF500O60304 480 aaPredicted RBP17.53■□□□□ 0.4
CLIP2-208ENST00000491075 PPIAL4FP0DN26 164 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 KITP10721 976 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 HOXB9P17482 250 aaPredicted RBP17.53■□□□□ 0.4
CLIP2-208ENST00000491075 PRTN3P24158 256 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 ZNF81P51508 661 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 CDH12P55289 794 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 CDK6Q00534 326 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 GLO1Q04760 184 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 PLP2Q04941 152 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 SLC3A1Q07837 685 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 TUSC1Q2TAM9 212 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 NRN1LQ496H8 165 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 GCNT6Q5T4J0 391 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 LRFN4Q6PJG9 635 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 DOK3Q7L591 496 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 SLC16A14Q7RTX9 510 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 LRRC17Q8N6Y2 441 aa17.53■□□□□ 0.4
CLIP2-208ENST00000491075 SIGLECL1Q8N7X8 197 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms