RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	NOX4	Q9NPH5	578 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	SACM1L	Q9NTJ5	587 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	NLK	Q9UBE8	527 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	GPN3	Q9UHW5	284 aa	Predicted RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	IKZF2	Q9UKS7	526 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	FBXL3	Q9UKT7	428 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF346	Q9UL40	294 aa	Known RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	B9D1	Q9UPM9	204 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	YARS2	Q9Y2Z4	477 aa	Known RBP	5.74	□□□□□ -1.49
FN1-223	ENST00000490833	TMED7	Q9Y3B3	224 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	HDGFL3	Q9Y3E1	203 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	SIT1	Q9Y3P8	196 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	COL4A2	P08572	1712 aa		5.74	□□□□□ -1.49
FN1-223	ENST00000490833	IGKV1D-42	A0A075B6H8	117 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	TRBV5-7	A0A0A0MS05	114 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833		A0A0G2JMP0	313 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833		A0A0X1KG70	313 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833		A0A1B0GUH1	482 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	TUBAL3	A6NHL2	446 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	SHISA7	A6NL88	538 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	NPIPA5	E9PKD4	350 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF593	O00488	134 aa	Predicted RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	PLPP3	O14495	311 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	KHNYN	O15037	678 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	EEF1E1	O43324	174 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	DNPH1	O43598	174 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	NARS	O43776	548 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	SCO2	O43819	266 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	EIF1B	O60739	113 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ICOSLG	O75144	302 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ALOX12B	O75342	701 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ZFPL1	O95159	310 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	BPNT1	O95861	308 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	IFNA7	P01567	189 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	TF	P02787	698 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	CLPS	P04118	112 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	MELTF	P08582	738 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	FAM157B	P0CG42	384 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	CD37	P11049	281 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	IL9	P15248	144 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	SPN	P16150	400 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	FST	P19883	344 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	TBP	P20226	339 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	RAB6A	P20340	208 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	NAA10	P41227	235 aa	Predicted RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	MECP2	P51608	486 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OR1D5	P58170	312 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	RAB14	P61106	215 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	RPS11	P62280	158 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	MAT1A	Q00266	395 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF117	Q03924	483 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	PUDP	Q08623	228 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	FGL1	Q08830	312 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ERV3-1	Q14264	604 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	SLC17A1	Q14916	467 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	PCK2	Q16822	640 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OXLD1	Q5BKU9	147 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	CEP78	Q5JTW2	689 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	CLVS2	Q5SYC1	327 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	LYSMD4	Q5XG99	296 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ANKRD16	Q6P6B7	361 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ZC3H14	Q6PJT7	736 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OPN5	Q6U736	354 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	FAM198B	Q6UWH4	519 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	STAC2	Q6ZMT1	411 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833		Q6ZS52	159 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	DGLUCY	Q7Z3D6	616 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	PPP1R3B	Q86XI6	285 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF761	Q86XN6	746 aa	Predicted RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	MEX3D	Q86XN8	651 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	SPIC	Q8N5J4	248 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	EXD3	Q8N9H8	876 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OR10H5	Q8NGA6	315 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OR4M2	Q8NGB6	313 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OR5D14	Q8NGL3	314 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OR6M1	Q8NGM8	313 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OR6N2	Q8NGY6	317 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OR1L3	Q8NH93	324 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	STT3B	Q8TCJ2	826 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	THEM6	Q8WUY1	208 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	YIPF5	Q969M3	257 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	TAAR8	Q969N4	342 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	MCHR2	Q969V1	340 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ZBTB8A	Q96BR9	441 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	C10orf35	Q96D05	121 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	CLIP3	Q96DZ5	547 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	SCMH1	Q96GD3	660 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833		Q96M85	177 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ZFP3	Q96NJ6	502 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	SORCS2	Q96PQ0	1159 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OR14A2	Q96R54	314 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	UQCC2	Q9BRT2	126 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	UTP23	Q9BRU9	249 aa	Known RBP	5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ZPBP	Q9BS86	351 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	NUDT9	Q9BW91	350 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	TPSD1	Q9BZJ3	242 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	VN1R1	Q9GZP7	353 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	OR51J1	Q9H342	316 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	LIN7B	Q9HAP6	207 aa		5.73	□□□□□ -1.49
FN1-223	ENST00000490833	ALKBH4	Q9NXW9	302 aa		5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms