RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PEG10Q86TG7 708 aaKnown RBP13.55□□□□□ -0.24
PLOD3-216ENST00000489927 C3orf56Q8N813 242 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 SMYD1Q8NB12 490 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 SYNPRQ8TBG9 265 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 GCDHQ92947 438 aaPredicted RBP13.55□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF566Q969W8 418 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 SPDL1Q96EA4 605 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 MCHR1Q99705 422 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF665Q9H7R5 613 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 HINT3Q9NQE9 182 aaKnown RBP13.55□□□□□ -0.24
PLOD3-216ENST00000489927 NKIRAS1Q9NYS0 192 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 TAS2R5Q9NYW4 299 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 RAB21Q9UL25 225 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 SLC22A23A1A5C7 686 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 TMEM89A2RUT3 159 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 M0R3H8 397 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
PLOD3-216ENST00000489927 LCKP06239 509 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 ANPEPP15144 967 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF250P15622 560 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 EGR1P18146 543 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 GPX2P18283 190 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 SELENOVP59797 346 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 MAGOHP61326 146 aaKnown RBP13.54□□□□□ -0.24
PLOD3-216ENST00000489927 RBBP4Q09028 425 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 MELKQ14680 651 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF74Q16587 644 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 PCGF3Q3KNV8 242 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 ACSM5Q6NUN0 579 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF613Q6PF04 617 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 HIPK4Q8NE63 616 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 SNX33Q8WV41 574 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 SLC25A44Q96H78 314 aaPredicted RBP13.54□□□□□ -0.24
PLOD3-216ENST00000489927 ARHGDIGQ99819 225 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 EVA1AQ9H8M9 152 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 CDH20Q9HBT6 801 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 TCF7L2Q9NQB0 619 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 GPR160Q9UJ42 338 aa13.54□□□□□ -0.24
PLOD3-216ENST00000489927 EVPLLA8MZ36 301 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 TRIM77I1YAP6 450 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 POLR3GO15318 223 aaPredicted RBP13.53□□□□□ -0.24
PLOD3-216ENST00000489927 DHHO43323 396 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 RNF13O43567 381 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 PLPP2O43688 288 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 CHP2O43745 196 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 FMO6PO60774 539 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 ENTPD5O75356 428 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 DEAF1O75398 565 aaPredicted RBP13.53□□□□□ -0.24
PLOD3-216ENST00000489927 MPZL1O95297 269 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 FARS2O95363 451 aaKnown RBP13.53□□□□□ -0.24
PLOD3-216ENST00000489927 SNAP29O95721 258 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 CH25HO95992 272 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 THY1P04216 161 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 QDPRP09417 244 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 PGA4P0DJD7 388 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 PGA3P0DJD8 388 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 CRYBB2P43320 205 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 ARFIP2P53365 341 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 ZP4Q12836 540 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 NPTX1Q15818 432 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 DUSP7Q16829 419 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 TEX29Q8N6K0 151 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 LRRC17Q8N6Y2 441 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 OR4K5Q8NGD3 323 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 OR6T1Q8NGN1 323 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF519Q8TB69 540 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 GTF3AQ92664 365 aaKnown RBP13.53□□□□□ -0.24
PLOD3-216ENST00000489927 ZMYND19Q96E35 227 aaPredicted RBP13.53□□□□□ -0.24
PLOD3-216ENST00000489927 EBF4Q9BQW3 602 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 TMPRSS13Q9BYE2 586 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 RNF121Q9H920 327 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 NANSQ9NR45 359 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 SLCO1C1Q9NYB5 712 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 NKIRAS2Q9NYR9 191 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.53□□□□□ -0.24
PLOD3-216ENST00000489927 CORO2BQ9UQ03 480 aa13.53□□□□□ -0.24
PLOD3-216ENST00000489927 IGHV1-69-2A0A0G2JMI3 117 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 A0A0G2JMP0 313 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 A0A0X1KG70 313 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 CPSF4LA6NMK7 179 aaKnown RBP13.52□□□□□ -0.25
PLOD3-216ENST00000489927 KPNA4O00629 521 aaPredicted RBP13.52□□□□□ -0.25
PLOD3-216ENST00000489927 LYPD3O95274 346 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 OPN1SWP03999 348 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 ADRA2CP18825 462 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 RAD52P43351 418 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 IDH3AP50213 366 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 UCP2P55851 309 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 PCBP3P57721 371 aaKnown RBP13.52□□□□□ -0.25
PLOD3-216ENST00000489927 TBC1D28Q2M2D7 210 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 SLC36A2Q495M3 483 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 MMEL1Q495T6 779 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 ENTPD8Q5MY95 495 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 TMEM53Q6P2H8 277 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 SLC16A14Q7RTX9 510 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 C1QL2Q7Z5L3 287 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 RBM45Q8IUH3 476 aaKnown RBP13.52□□□□□ -0.25
PLOD3-216ENST00000489927 ICA1LQ8NDH6 482 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 GPR32P1Q8NGA4 272 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 OR4M2Q8NGB6 313 aa13.52□□□□□ -0.25
PLOD3-216ENST00000489927 C11orf40Q8WZ69 217 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms