RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TRAPPC3O43617 180 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC19A2O60779 497 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 PSIP1O75475 530 aaKnown RBP2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 PDE5AO76074 875 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 CCNB2O95067 398 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 LYPD3O95274 346 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 VAPBO95292 243 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ETHE1O95571 254 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ACTL6AO96019 429 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 CST4P01036 141 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 GP1BAP07359 652 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 DUX4L2P0CJ85 424 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 DUX4L3P0CJ86 424 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 DUX4L4P0CJ87 422 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 DUX4L5P0CJ88 424 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 DUX4L6P0CJ89 424 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 DUX4L7P0CJ90 424 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ABOP16442 354 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 CA6P23280 308 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 OPRD1P41143 372 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ETV5P41161 510 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 AQP2P41181 271 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 PPP1R2P41236 205 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 MAP3K8P41279 467 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ZFP36L2P47974 494 aaKnown RBP2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ATP12AP54707 1039 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 STK38Q15208 465 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 NECTIN1Q15223 517 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 PSG3Q16557 428 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 KLHL38Q2WGJ6 581 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 RFTN2Q52LD8 501 aaPredicted RBP2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 C14orf177Q52M58 125 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ASPRV1Q53RT3 343 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 PPM1LQ5SGD2 360 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 GPRC6AQ5T6X5 926 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 C9orf135Q5VTT2 229 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 C1orf189Q5VU69 101 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 PVRIGQ6DKI7 326 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 PTRHD1Q6GMV3 140 aaKnown RBP2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 PPP1R2P3Q6NXS1 205 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 DUX4L9Q6RFH8 374 aaPredicted RBP2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 LRRC74BQ6ZQY2 392 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 LINC00336Q6ZUF6 198 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 PAGE2Q7Z2X7 111 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 HDDC2Q7Z4H3 204 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 SNX20Q7Z614 316 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ISCA2Q86U28 154 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 MARCH9Q86YJ5 346 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 OR2AP1Q8NGE2 309 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 OR6X1Q8NH79 312 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 RPLP0P6Q8NHW5 317 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 FBXO25Q8TCJ0 367 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ZPLD1Q8TCW7 415 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 AENQ8WTP8 325 aaKnown RBP2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ACOT11Q8WXI4 607 aaPredicted RBP2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 GTF2H4Q92759 462 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 SDSLQ96GA7 329 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 CELF6Q96J87 481 aaKnown RBP2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 FOXN4Q96NZ1 517 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 TNFRSF13CQ96RJ3 184 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 CYP2S1Q96SQ9 504 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ECSITQ9BQ95 431 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 NIPSNAP3BQ9BS92 247 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 SLITRK2Q9H156 845 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 GBA3Q9H227 469 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ADNPQ9H2P0 1102 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF696Q9H7X3 374 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 IMP3Q9NV31 184 aaKnown RBP2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 EIF3KQ9UBQ5 218 aaKnown RBP2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 DUX4Q9UBX2 424 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ERVW-1Q9UQF0 538 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 ADAMTSL1Q8N6G6 1762 aa2.61□□□□□ -1.99
DEPDC1-204ENST00000489862 IGLV5-45A0A087WSX0 123 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 MGAT4DA6NG13 374 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 LRRIQ3A6PVS8 624 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 M0R3G1 203 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC1A7O00341 560 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 GOSR2O14653 212 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC9A3R1O14745 358 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CXCL13O43927 109 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CIAO1O76071 339 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 AP2A1O95782 977 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 IGHV4-39P01824 125 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 RPLP0P05388 317 aaKnown RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 KRT16P08779 473 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC2A2P11168 524 aaPredicted RBP2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 LIFP15018 202 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 MAGP20916 626 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 CNR1P21554 472 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 UGT1A4P22310 534 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 EDNRAP25101 427 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 GIFP27352 417 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 EPHX2P34913 555 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 MAP2K2P36507 400 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 SLC26A3P40879 764 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 MAGEA6P43360 314 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 BLVRAP53004 296 aa2.6□□□□□ -1.99
DEPDC1-204ENST00000489862 UCNP55089 124 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms