RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ANGPT4Q9Y264 503 aa6.29□□□□□ -1.4
EXOSC3-206ENST00000489414 INSIG2Q9Y5U4 225 aa6.29□□□□□ -1.4
EXOSC3-206ENST00000489414 GMEB1Q9Y692 573 aa6.29□□□□□ -1.4
EXOSC3-206ENST00000489414 SMIM31A0A1B0GVY4 71 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 SH3PXD2BA1X283 911 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 C7orf72A4D263 438 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 VGLL3A8MV65 326 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 PDLIM1O00151 329 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 PLPP1O14494 284 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 PDPK1O15530 556 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 TBX19O60806 448 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 SCN2BO60939 215 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 SYNGR4O95473 234 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 H6PDO95479 791 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 C6orf47O95873 294 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 CBX7O95931 251 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 FABP3P05413 133 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 THRBP10828 461 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 DDCP20711 480 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 UQCRC2P22695 453 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 EDNRAP25101 427 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 NTSP30990 170 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 KDELR2P33947 212 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 AHRP35869 848 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 RPL5P46777 297 aaKnown RBP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 GZMMP51124 257 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 ARFIP1P53367 373 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 MANFP55145 182 aaKnown RBP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 STXBP1P61764 594 aaKnown RBP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 ESRRGP62508 458 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 BTN3A2P78410 334 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 ID2Q02363 134 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 TEKQ02763 1124 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 MVKQ03426 396 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 RGNQ15493 299 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 SPDYE7PQ495Y7 208 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 TTC23Q5W5X9 447 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 DHRS7BQ6IAN0 325 aaPredicted RBP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 OR5M10Q6IEU7 315 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 OR4C11Q6IEV9 310 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 OR52E8Q6IFG1 317 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 VHLLQ6RSH7 139 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 EIF3MQ7L2H7 374 aaKnown RBP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 EPHX4Q8IUS5 362 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 C1orf174Q8IYL3 243 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 MAPKAPK5-AS1Q8N8E1 139 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 OR10S1Q8NGN2 331 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 PNPT1Q8TCS8 783 aaKnown RBP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 ZFP90Q8TF47 636 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 OR5P2Q8WZ92 322 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 TFAP2CQ92754 450 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 ZNF764Q96H86 408 aaPredicted RBP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 F2RL3Q96RI0 385 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 YTHDF1Q9BYJ9 559 aaKnown RBP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 SPNS1Q9H2V7 528 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 TMEM165Q9HC07 324 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 VCX3AQ9NNX9 186 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 GIMAP4Q9NUV9 329 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 THUMPD1Q9NXG2 353 aaKnown RBP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 KIF17Q9P2E2 1029 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 ZNF639Q9UID6 485 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 ERVK-19Q9WJR5 959 aa6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 POLR3KQ9Y2Y1 108 aaPredicted RBP6.28□□□□□ -1.4
EXOSC3-206ENST00000489414 A0A087WXM4 84 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 MYO1GB0I1T2 1018 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 C5orf58C9J3I9 102 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 TRAPPC2LH3BP13 241 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 ACOX3O15254 700 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 CXCL13O43927 109 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 FOXH1O75593 365 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 ATP6V1B1P15313 513 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 NAGAP17050 411 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 HK1P19367 917 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 EFNA1P20827 205 aaPredicted RBP6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 ZNF10P21506 573 aaPredicted RBP6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 BSGP35613 385 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 MAGEA8P43361 318 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 RPS6KA3P51812 740 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 EFNB2P52799 333 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 LIM2P55344 173 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 HBA1P69905 142 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 IGLV3-21P80748 117 aaPredicted RBP6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 SCARB2Q14108 478 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 SLC36A3Q495N2 470 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 KCTD21Q4G0X4 260 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 LIN52Q52LA3 116 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 ZNF385BQ569K4 471 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 OR2T5Q6IEZ7 315 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 BRD3OSQ6XYD6 125 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 CBLL1Q75N03 491 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 NUP54Q7Z3B4 507 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 VN1R5Q7Z5H4 357 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 PATL1Q86TB9 770 aaKnown RBP6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 C8orf59Q8N0T1 100 aaPredicted RBP6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 KLHDC1Q8N7A1 406 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 ANKRD53Q8N9V6 530 aa6.27□□□□□ -1.41
EXOSC3-206ENST00000489414 WDR31Q8NA23 367 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms