RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 A0A087WUJ7 227 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 TRGV8A0A0C4DH27 118 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 IL1AP01583 271 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 PNMTP11086 282 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 PLA2G2AP14555 144 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 PTNP21246 168 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 CA7P43166 264 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 RORCP51449 518 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 OR2G6Q5TZ20 316 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 C1QL3Q5VWW1 255 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 LINC00114Q6XXX2 140 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 CXXC5Q7LFL8 322 aaKnown RBP17.29■□□□□ 0.36
CCM2-216ENST00000488727 LYSMD2Q8IV50 215 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 OR10D3Q8NH80 312 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 PRR7Q8TB68 274 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 BPIFA2Q96DR5 249 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 ZNF845Q96IR2 970 aaPredicted RBP17.29■□□□□ 0.36
CCM2-216ENST00000488727 OR5B2Q96R09 309 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 ZNF649Q9BS31 505 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 MED18Q9BUE0 208 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 SP140LQ9H930 580 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 SIGLEC7Q9Y286 467 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 HIVEP3Q5T1R4 2406 aa17.29■□□□□ 0.36
CCM2-216ENST00000488727 FIGNL2A6NMB9 653 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 GJE1A6NN92 205 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 LOC110117498-PIK3R3F6TDL0 507 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 J3QRE1 110 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 WDR1O75083 606 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 APOL3O95236 402 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 GAAP10253 952 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 TFPIP10646 304 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 GABRA5P31644 462 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 MAP2K6P52564 334 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 ACSF3Q4G176 576 aaPredicted RBP17.28■□□□□ 0.36
CCM2-216ENST00000488727 NIPAL3Q6P499 406 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 ADGRE4PQ86SQ3 457 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 OR2V1Q8NHB1 315 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 ZPLD1Q8TCW7 415 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 BARHL1Q9BZE3 327 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 TP63Q9H3D4 680 aaPredicted RBP17.28■□□□□ 0.36
CCM2-216ENST00000488727 H2AFY2Q9P0M6 372 aaPredicted RBP17.28■□□□□ 0.36
CCM2-216ENST00000488727 BAIAP2Q9UQB8 552 aa17.28■□□□□ 0.36
CCM2-216ENST00000488727 PHF3Q92576 2039 aaKnown RBP17.28■□□□□ 0.36
CCM2-216ENST00000488727 IQCMA0A1B0GVH7 501 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 AHRRA9YTQ3 701 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 NPIPB7O75200 414 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 SLC2A10O95528 541 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 HNRNPCP07910 306 aaKnown RBP eCLIP17.27■□□□□ 0.36
CCM2-216ENST00000488727 EIF1AXP47813 144 aaKnown RBP17.27■□□□□ 0.36
CCM2-216ENST00000488727 MYBPHQ13203 477 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 HBMQ6B0K9 141 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 CD200R1LQ6Q8B3 271 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 CPOQ8IVL8 374 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 KLHL36Q8N4N3 616 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 BBS1Q8NFJ9 593 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 DDIT4LQ96D03 193 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 WDFY2Q96P53 400 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 SRXN1Q9BYN0 137 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 MEPEQ9NQ76 525 aaPredicted RBP17.27■□□□□ 0.36
CCM2-216ENST00000488727 CMC2Q9NRP2 79 aa17.27■□□□□ 0.36
CCM2-216ENST00000488727 A8MVM7 634 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 CXCL13O43927 109 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 PTP4A3O75365 173 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 GABRA1P14867 456 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 FKBP2P26885 142 aaKnown RBP17.27■□□□□ 0.35
CCM2-216ENST00000488727 FGF9P31371 208 aaPredicted RBP17.27■□□□□ 0.35
CCM2-216ENST00000488727 SPANXN2Q5MJ10 180 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 SMARCD3Q6STE5 483 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 RPTNQ6XPR3 784 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 NCCRP1Q6ZVX7 275 aaPredicted RBP17.27■□□□□ 0.35
CCM2-216ENST00000488727 SHFQ7M4L6 423 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 OR4F15Q8NGB8 312 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 GATAD2BQ8WXI9 593 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 SLC25A46Q96AG3 418 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 COQ7Q99807 217 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 ERVK13-1Q9NX77 482 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 TRAPPC4Q9Y296 219 aa17.27■□□□□ 0.35
CCM2-216ENST00000488727 SLC35F4A4IF30 521 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 IMPDH2P12268 514 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 DIO1P49895 249 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 CASP6P55212 293 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 RPS25P62851 125 aaKnown RBP17.26■□□□□ 0.35
CCM2-216ENST00000488727 BDH1Q02338 343 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 C1orf185Q5T7R7 199 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 C1orf140Q5VVS0 124 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 TMPPEQ6ZT21 453 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 SEM1Q6ZVN7 128 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 MEPCEQ7L2J0 689 aaKnown RBP17.26■□□□□ 0.35
CCM2-216ENST00000488727 OR13C2Q8NGS9 318 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 KTI12Q96EK9 354 aaPredicted RBP17.26■□□□□ 0.35
CCM2-216ENST00000488727 TRIB1Q96RU8 372 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 KCNS3Q9BQ31 491 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 CCDC32Q9BV29 185 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 ABCB10Q9NRK6 738 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 CLCF1Q9UBD9 225 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 IL20RAQ9UHF4 553 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 HDGFL3Q9Y3E1 203 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 MYO7BQ6PIF6 2116 aa17.26■□□□□ 0.35
CCM2-216ENST00000488727 TBX1O43435 398 aa17.25■□□□□ 0.35
CCM2-216ENST00000488727 AKAP8O43823 692 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms