RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TRAM2Q15035 370 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 EFNB3Q15768 340 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 PIWIL3Q7Z3Z3 882 aaKnown RBP15.36■□□□□ 0.05
ITGB1-215ENST00000488494 SKA3Q8IX90 412 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 NRMQ8IXM6 262 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 SLC22A24Q8N4F4 322 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 SYT14Q8NB59 555 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 SORCS2Q96PQ0 1159 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 SEPHS2Q99611 448 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 SH3GL3Q99963 347 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 FKBP7Q9Y680 259 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 CR1P17927 2039 aa15.36■□□□□ 0.05
ITGB1-215ENST00000488494 B9A039 149 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 INAFM1C9JVW0 142 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 hCG_2039718K7EN88 272 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 ENTPD5O75356 428 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 TSPAN19P0C672 248 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 OR8G3PP0DMU2 310 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 NPR2P20594 1047 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 MAKP20794 623 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 RAB1AP62820 205 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 DAG1Q14118 895 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 HIST3H3Q16695 136 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 ALG10Q5BKT4 473 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 ARMC4Q5T2S8 1044 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 SVOPLQ8N434 492 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 RNF148Q8N7C7 305 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 ANKS4BQ8N8V4 417 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 IL17RDQ8NFM7 739 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 OR10H5Q8NGA6 315 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 OR4K5Q8NGD3 323 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 OR13C2Q8NGS9 318 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 FGFBP3Q8TAT2 258 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 MCHR2Q969V1 340 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 ZNF75AQ96N20 296 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 MRPL13Q9BYD1 178 aaKnown RBP15.35■□□□□ 0.05
ITGB1-215ENST00000488494 PLK3Q9H4B4 646 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 ADA2Q9NZK5 511 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 EGFL7Q9UHF1 273 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 HIF3AQ9Y2N7 669 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 CSPG4Q6UVK1 2322 aa15.35■□□□□ 0.05
ITGB1-215ENST00000488494 HIVEP2P31629 2446 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 ALPK2Q86TB3 2170 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 TRAV27A0A087WT01 109 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 NPIPB13A6NJU9 1138 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 CENPBD1B2RD01 187 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 NPIPB4C9JG80 1138 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 TRMUO75648 421 aaKnown RBP15.34■□□□□ 0.05
ITGB1-215ENST00000488494 PRSS23O95084 383 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 FARS2O95363 451 aaKnown RBP15.34■□□□□ 0.05
ITGB1-215ENST00000488494 CSF3P09919 207 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 ACADSP16219 412 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 ZNF84P51523 738 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 PPP2R2BQ00005 443 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 RAB39AQ14964 217 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 LAPTM4AQ15012 233 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 KRTAP21-3Q3LHN1 58 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 ZNF730Q6ZMV8 503 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 IGFN1Q86VF2 1251 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 CYP4Z1Q86W10 505 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 ACOT11Q8WXI4 607 aaPredicted RBP15.34■□□□□ 0.05
ITGB1-215ENST00000488494 FAM168AQ92567 244 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 VRK1Q99986 396 aaPredicted RBP15.34■□□□□ 0.05
ITGB1-215ENST00000488494 DENND2DQ9H6A0 471 aaPredicted RBP15.34■□□□□ 0.05
ITGB1-215ENST00000488494 STX18Q9P2W9 335 aaKnown RBP15.34■□□□□ 0.05
ITGB1-215ENST00000488494 RPS6KA6Q9UK32 745 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 FBXL3Q9UKT7 428 aa15.34■□□□□ 0.05
ITGB1-215ENST00000488494 A0A096LNT2 108 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 HTR3EA5X5Y0 456 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 EFCAB9A8MZ26 197 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 GPRIN2O60269 458 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 SLC2A10O95528 541 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 F12P00748 615 aaPredicted RBP15.33■□□□□ 0.04
ITGB1-215ENST00000488494 NR4A1P22736 598 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 GPR4P46093 362 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 PPOXP50336 477 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 FMODQ06828 376 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 CD47Q08722 323 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 ZNF584Q8IVC4 421 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 CDK20Q8IZL9 346 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 FAM86B1Q8N7N1 296 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 FAM156AQ8NDB6 213 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 C10orf105Q8TEF2 133 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 HDAC2Q92769 488 aaKnown RBP15.33■□□□□ 0.04
ITGB1-215ENST00000488494 TXNIPQ9H3M7 391 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 ENPP4Q9Y6X5 453 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 V9GYQ6 96 aa15.33■□□□□ 0.04
ITGB1-215ENST00000488494 A0A087WUU8 490 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 IGHMP01871 453 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 TP53P04637 393 aaPredicted RBP15.32■□□□□ 0.04
ITGB1-215ENST00000488494 ZNF35P13682 527 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 SLC25A16P16260 332 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 GALK2Q01415 458 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 PRKCDQ05655 676 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 C10orf128Q5T292 105 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 GKAP1Q5VSY0 366 aaPredicted RBP15.32■□□□□ 0.04
ITGB1-215ENST00000488494 TMEM53Q6P2H8 277 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 TBPL2Q6SJ96 375 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 MBOAT2Q6ZWT7 520 aa15.32■□□□□ 0.04
ITGB1-215ENST00000488494 SLC16A14Q7RTX9 510 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms