RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ITGADQ13349 1161 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 KRR1Q13601 381 aaKnown RBP9.09□□□□□ -0.95
SKA1-204ENST00000488454 P2RY6Q15077 328 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 LRRC36Q1X8D7 754 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 SLC35F1Q5T1Q4 408 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 ARMC4Q5T2S8 1044 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 ANKRD34AQ69YU3 496 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 KDM4DQ6B0I6 523 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 SLC27A4Q6P1M0 643 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 ZNF474Q6S9Z5 364 aaPredicted RBP9.09□□□□□ -0.95
SKA1-204ENST00000488454 Q6ZT83 130 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 JAZF1Q86VZ6 243 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 PARP8Q8N3A8 854 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 SYT14Q8NB59 555 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 RELL2Q8NC24 303 aaPredicted RBP9.09□□□□□ -0.95
SKA1-204ENST00000488454 RNASE6Q93091 150 aaKnown RBP9.09□□□□□ -0.95
SKA1-204ENST00000488454 Q96M85 177 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 TSPAN32Q96QS1 320 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 ALG12Q9BV10 488 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 ULBP2Q9BZM5 246 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 VCXQ9H320 206 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 RNPEPL1Q9HAU8 725 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 SLC7A10Q9NS82 523 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 USE1Q9NZ43 259 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 GLTPQ9NZD2 209 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 JKAMPQ9P055 326 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 REV1Q9UBZ9 1251 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 ADAM18Q9Y3Q7 739 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 MAST4O15021 2626 aa9.09□□□□□ -0.95
SKA1-204ENST00000488454 TEX13CA0A0J9YWL9 993 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 C16orf97H3BN30 126 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 MGRN1O60291 552 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 MITFO75030 526 aaPredicted RBP9.08□□□□□ -0.96
SKA1-204ENST00000488454 UPK3AO75631 287 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 TXNDC12O95881 172 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 RENP00797 406 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 ALPLP05186 524 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 QDPRP09417 244 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 IL32P24001 234 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 MPGP29372 298 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 CD79BP40259 229 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 ROR2Q01974 943 aaKnown RBP9.08□□□□□ -0.96
SKA1-204ENST00000488454 RUNX1T1Q06455 604 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 SRSF1Q07955 248 aaKnown RBP eCLIP9.08□□□□□ -0.96
SKA1-204ENST00000488454 RIPK1Q13546 671 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 GINS1Q14691 196 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 FBXL19-AS1Q494R0 122 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 THEM4Q5T1C6 240 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 LPCAT4Q643R3 524 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 FAM122BQ7Z309 247 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 ADCK1Q86TW2 530 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 TMEM123Q8N131 208 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 GALNT4Q8N4A0 578 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 OR52E2Q8NGJ4 325 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 ZNF519Q8TB69 540 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 TMEM54Q969K7 222 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 RASD2Q96D21 266 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 PLEKHA8Q96JA3 519 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 MRPL13Q9BYD1 178 aaKnown RBP9.08□□□□□ -0.96
SKA1-204ENST00000488454 PRRG3Q9BZD7 231 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 PLA2G12AQ9BZM1 189 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 RIBC2Q9H4K1 309 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 CRLF2Q9HC73 371 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 KLHL21Q9UJP4 597 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 GPR52Q9Y2T5 361 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 PHF3Q92576 2039 aaKnown RBP9.08□□□□□ -0.96
SKA1-204ENST00000488454 MPDZO75970 2070 aa9.08□□□□□ -0.96
SKA1-204ENST00000488454 KIAA1549Q9HCM3 1950 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 PRSS37A4D1T9 235 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 RIIAD1A6NNX1 92 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 BHLHE40O14503 412 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 TP53P04637 393 aaPredicted RBP9.07□□□□□ -0.96
SKA1-204ENST00000488454 PGA4P0DJD7 388 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 PGA3P0DJD8 388 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 HIST1H1CP16403 213 aaKnown RBP9.07□□□□□ -0.96
SKA1-204ENST00000488454 IGHV1-2P23083 117 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 EDNRAP25101 427 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 GRK5P34947 590 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 PEX19P40855 299 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 ZNF84P51523 738 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 CDK5Q00535 292 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.07□□□□□ -0.96
SKA1-204ENST00000488454 FAM27E3Q08E93 113 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 NPRL3Q12980 569 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 PTGES3Q15185 160 aaKnown RBP9.07□□□□□ -0.96
SKA1-204ENST00000488454 CDSNQ15517 529 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 PGGHGQ32M88 737 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 SFRP5Q5T4F7 317 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 C9orf135Q5VTT2 229 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 OR7E24Q6IFN5 339 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 LEG1Q6P5S2 330 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 DNM1P34Q6PK57 102 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 CXorf67Q86X51 503 aaPredicted RBP9.07□□□□□ -0.96
SKA1-204ENST00000488454 GABRG1Q8N1C3 465 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 LNX2Q8N448 690 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 IQCF1Q8N6M8 205 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 PACRGLQ8N7B6 248 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 NOXO1Q8NFA2 376 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 STEAP2Q8NFT2 490 aa9.07□□□□□ -0.96
SKA1-204ENST00000488454 OR8D4Q8NGM9 314 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms