RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 H3F3CQ6NXT2 135 aa12.91□□□□□ -0.34
COL16A1-214ENST00000488128 KIRREL2Q6UWL6 708 aa12.91□□□□□ -0.34
COL16A1-214ENST00000488128 SLC2A12Q8TD20 617 aa12.91□□□□□ -0.34
COL16A1-214ENST00000488128 UTP23Q9BRU9 249 aaKnown RBP12.91□□□□□ -0.34
COL16A1-214ENST00000488128 FAM96BQ9Y3D0 163 aa12.91□□□□□ -0.34
COL16A1-214ENST00000488128 WDR87Q6ZQQ6 2873 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 PTPRSQ13332 1948 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 OR2AT4A6NND4 320 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 EEF1E1-BLOC1S5C9J1V9 151 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 P2RX6O15547 441 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 GPRIN2O60269 458 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 PRSS3P35030 304 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 CDKN2AP42771 156 aaKnown RBP12.9□□□□□ -0.34
COL16A1-214ENST00000488128 GAS6Q14393 721 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 RBMS3Q6XE24 437 aaKnown RBP12.9□□□□□ -0.34
COL16A1-214ENST00000488128 RD3Q7Z3Z2 195 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 SLC35F3Q8IY50 421 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 EID2Q8N6I1 236 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 POMGNT2Q8NAT1 580 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 SUSD6Q92537 303 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 COX14Q96I36 57 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 TREM1Q9NP99 234 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 RXFP3Q9NSD7 469 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 MRM2Q9UI43 246 aaKnown RBP12.9□□□□□ -0.34
COL16A1-214ENST00000488128 SEC16AO15027 2179 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 ARPC4-TTLL3A0A0A6YYG9 625 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 LINC01553A4QN01 128 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 FGF17O60258 216 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 HLA-AP01891 365 aaKnown RBP12.9□□□□□ -0.34
COL16A1-214ENST00000488128 THBS1P07996 1170 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 HNRNPA1P09651 372 aaKnown RBP eCLIP12.9□□□□□ -0.34
COL16A1-214ENST00000488128 UBBP0CG47 229 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 UBCP0CG48 685 aaKnown RBP12.9□□□□□ -0.34
COL16A1-214ENST00000488128 CCKBRP32239 447 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 RPS27AP62979 156 aaKnown RBP12.9□□□□□ -0.34
COL16A1-214ENST00000488128 UBA52P62987 128 aaKnown RBP12.9□□□□□ -0.34
COL16A1-214ENST00000488128 SCRN3Q0VDG4 424 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 SWI5Q1ZZU3 235 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 KCTD9Q7L273 389 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 RAB11FIP2Q7L804 512 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 DPY19L4Q7Z388 723 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 OR5T2Q8NGG2 359 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 NDRG3Q9UGV2 375 aa12.9□□□□□ -0.34
COL16A1-214ENST00000488128 CPED1A4D0V7 1026 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 FITM1A5D6W6 292 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 ELOA3DA6NLF2 546 aaPredicted RBP12.89□□□□□ -0.35
COL16A1-214ENST00000488128 RAB3DO95716 219 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 CALCBP10092 127 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 DHRS2Q13268 280 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 RBM39Q14498 530 aaKnown RBP12.89□□□□□ -0.35
COL16A1-214ENST00000488128 C2orf76Q3KRA6 126 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 ZNF528Q3MIS6 628 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 ELOA3BQ3SY89 546 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 ELOA3Q8NG57 546 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 TSEN15Q8WW01 171 aaKnown RBP12.89□□□□□ -0.35
COL16A1-214ENST00000488128 ZNF304Q9HCX3 659 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 STARD5Q9NSY2 213 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 COMMD9Q9P000 198 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 WDFY3Q8IZQ1 3526 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 A0A1B0GW55 424 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 RNF222A6NCQ9 220 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 CSF1P09603 554 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 ZNF806P0C7X5 589 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 DUX4L2P0CJ85 424 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 DUX4L3P0CJ86 424 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 DUX4L4P0CJ87 422 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 DUX4L5P0CJ88 424 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 DUX4L6P0CJ89 424 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 DUX4L7P0CJ90 424 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 MECP2P51608 486 aaKnown RBP12.89□□□□□ -0.35
COL16A1-214ENST00000488128 ARFIP1P53367 373 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 MRPS10P82664 201 aaKnown RBP12.89□□□□□ -0.35
COL16A1-214ENST00000488128 ILF3Q12906 894 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL16A1-214ENST00000488128 PAN3Q58A45 887 aaKnown RBP12.89□□□□□ -0.35
COL16A1-214ENST00000488128 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 ZNF227Q86WZ6 799 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 GABRG1Q8N1C3 465 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 SVBPQ8N300 66 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 OR6N2Q8NGY6 317 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 WDR76Q9H967 626 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 DUX4Q9UBX2 424 aa12.89□□□□□ -0.35
COL16A1-214ENST00000488128 C13orf42A0A1B0GVH6 325 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 EIF3GO75821 320 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL16A1-214ENST00000488128 SNRPEP62304 92 aaKnown RBP12.88□□□□□ -0.35
COL16A1-214ENST00000488128 ALKBH1Q13686 389 aaKnown RBP12.88□□□□□ -0.35
COL16A1-214ENST00000488128 GLT8D1Q68CQ7 371 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 C3orf33Q6P1S2 294 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 DGAT2L6Q6ZPD8 337 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 SLC35D2Q76EJ3 337 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 ZNF765Q7L2R6 523 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 FAM220AQ7Z4H9 259 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 OR10R2Q8NGX6 335 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 CCDC74AQ96AQ1 378 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 CMTM3Q96MX0 182 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 FAM117AQ9C073 453 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 DHCR7Q9UBM7 475 aaKnown RBP12.88□□□□□ -0.35
COL16A1-214ENST00000488128 DPP7Q9UHL4 492 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 SERTAD3Q9UJW9 196 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 MKL2Q9ULH7 1088 aa12.88□□□□□ -0.35
COL16A1-214ENST00000488128 MYO9BQ13459 2157 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms