RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 PEX19P40855 299 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 BIDP55957 195 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 NCS1P62166 190 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 ARG2P78540 354 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 RELBQ01201 579 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 NHLH1Q02575 133 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF85Q03923 595 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 CDC20Q12834 499 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 MRPL28Q13084 256 aaKnown RBP6.31□□□□□ -1.4
SF3A3-206ENST00000487062 TBC1D25Q3MII6 688 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 CDONQ4KMG0 1287 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 ATP1A1-AS1Q5TC04 95 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 LINC01590Q5TEZ4 76 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 LINC00299Q6ZSB3 139 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 ESPNLQ6ZVH7 1005 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 FAM220AQ7Z4H9 259 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 YRDCQ86U90 279 aaKnown RBP6.31□□□□□ -1.4
SF3A3-206ENST00000487062 SULF2Q8IWU5 870 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 OR6V1Q8N148 313 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 KDM8Q8N371 416 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 TMEM178AQ8NBL3 297 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 MDS2Q8NDY4 140 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 NDNFQ8TB73 568 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 DYNC2LI1Q8TCX1 351 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 ZFAND2BQ8WV99 257 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 TM9SF4Q92544 642 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 HAS2Q92819 552 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 RELTQ969Z4 430 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 C4orf36Q96KX1 117 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 ADAD1Q96M93 576 aaKnown RBP6.31□□□□□ -1.4
SF3A3-206ENST00000487062 TSSK2Q96PF2 358 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 UBL7Q96S82 380 aaPredicted RBP6.31□□□□□ -1.4
SF3A3-206ENST00000487062 INTS14Q96SY0 518 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF649Q9BS31 505 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 NUAK2Q9H093 628 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.31□□□□□ -1.4
SF3A3-206ENST00000487062 MARCH7Q9H992 704 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 SIAEQ9HAT2 523 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 TIGARQ9NQ88 270 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 QPCTLQ9NXS2 382 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 PLA2G3Q9NZ20 509 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 LAMP5Q9UJQ1 280 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 A0A0J9YW62 118 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 PNMA8CA0A1B0GUJ8 204 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 TRDV1A0A1B0GX56 115 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 A0A1W2PQL4 384 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 TVP23AA6NH52 213 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 HSPB2A8KAH6 182 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 FAM171A2A8MVW0 826 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 NPIPA2E9PIF3 369 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 NPIPA3F8WFD2 350 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 ACOT7O00154 380 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 DCTN6O00399 190 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 NME2P1O60361 137 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 GFRA3O60609 400 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 GPX5O75715 221 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 CLPXO76031 633 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 IGHG1P01857 330 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 KRT8P05787 483 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 HPNP05981 417 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 RFPL3SP0C7P2 107 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF823P16415 610 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 POU3F2P20265 443 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 NME2P22392 152 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 ENPP1P22413 925 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 GALP22466 123 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 CD79BP40259 229 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 CRYBB2P43320 205 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 MEOX1P50221 254 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 P2RY4P51582 365 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 CCL11P51671 97 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 AGFG1P52594 562 aaKnown RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 OR12D2P58182 307 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 CLRN1P58418 232 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 B3GALT5-AS1P59052 145 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 RAC3P60763 192 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 RPS3AP61247 264 aaKnown RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 H3F3AP84243 136 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 GLO1Q04760 184 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 FOXO1Q12778 655 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 DYNC1I2Q13409 638 aaKnown RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 POU4F3Q15319 338 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 HSPB2Q16082 182 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 RSPO4Q2I0M5 234 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 CCDC58Q4VC31 144 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 WIPI1Q5MNZ9 446 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-206ENST00000487062 THEM4Q5T1C6 240 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 HBMQ6B0K9 141 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 ASB18Q6ZVZ8 466 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 GALNTL5Q7Z4T8 443 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 GPAT4Q86UL3 456 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 SLC22A16Q86VW1 577 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 CDC20BQ86Y33 519 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 TIGD4Q8IY51 512 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 CELF2-AS1Q8N7Q2 184 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 OR10H5Q8NGA6 315 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 OR6N2Q8NGY6 317 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 OR6X1Q8NH79 312 aa6.3□□□□□ -1.4
SF3A3-206ENST00000487062 ZNRF4Q8WWF5 429 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms