RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MAD2L1BPQ15013 274 aaPredicted RBP21.12■□□□□ 0.97
LIME1-206ENST00000487026 TRIP10Q15642 601 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 NANOGNBQ7Z5D8 188 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 CALHM3Q86XJ0 350 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 PFN4Q8NHR9 129 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 RASSF5Q8WWW0 418 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 SNX18Q96RF0 628 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 ECSITQ9BQ95 431 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 TMEM38BQ9NVV0 291 aa21.12■□□□□ 0.97
LIME1-206ENST00000487026 MYEF2Q9P2K5 600 aaKnown RBP21.12■□□□□ 0.97
LIME1-206ENST00000487026 FXYD1O00168 92 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 F13BP05160 661 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 PGA4P0DJD7 388 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 PGA3P0DJD8 388 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 OR8G3PP0DMU2 310 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 EVX1P49640 407 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 MYBPC1Q00872 1141 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 SRSF2Q01130 221 aaKnown RBP21.11■□□□□ 0.97
LIME1-206ENST00000487026 RUNX1T1Q06455 604 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 RIN1Q13671 783 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 FXNQ16595 210 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 DEF8Q6ZN54 512 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 OR4K5Q8NGD3 323 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 TMEM255BQ8WV15 326 aa21.11■□□□□ 0.97
LIME1-206ENST00000487026 ARGLU1Q9NWB6 273 aaPredicted RBP21.11■□□□□ 0.97
LIME1-206ENST00000487026 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.1■□□□□ 0.975e-7■■□□□ 14.4
LIME1-206ENST00000487026 M0R233 179 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 SERPINA5P05154 406 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 TACSTD2P09758 323 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 CCL2P13500 99 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 FUT1P19526 365 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 OR1E2P47887 323 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 CHN2P52757 468 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 UGT2B15P54855 530 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 TAS2R41P59536 307 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 PIN1Q13526 163 aaPredicted RBP21.1■□□□□ 0.97
LIME1-206ENST00000487026 MMEL1Q495T6 779 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 SYT14Q8NB59 555 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 ZNF347Q96SE7 839 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 SH3GL1Q99961 368 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 RNF121Q9H920 327 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 DUSP13Q9UII6 198 aa21.1■□□□□ 0.97
LIME1-206ENST00000487026 HPXP02790 462 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 MT-ND1P03886 318 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 COL8A2P25067 703 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 APEX1P27695 318 aaKnown RBP21.09■□□□□ 0.97
LIME1-206ENST00000487026 CLRN1P58418 232 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 RPL18Q07020 188 aaKnown RBP21.09■□□□□ 0.97
LIME1-206ENST00000487026 KLF10Q13118 480 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 ALKBH6Q3KRA9 238 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 REP15Q6BDI9 236 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 PAQR4Q8N4S7 273 aaPredicted RBP21.09■□□□□ 0.97
LIME1-206ENST00000487026 OR8J3Q8NGG0 315 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 MCHR2Q969V1 340 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 ZNF583Q96ND8 569 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 OR51B6Q9H340 312 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 MS4A5Q9H3V2 200 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 C20orf141Q9NUB4 165 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 RIMS3Q9UJD0 308 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 FBXL3Q9UKT7 428 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 BAG5Q9UL15 447 aa21.09■□□□□ 0.97
LIME1-206ENST00000487026 LOC100653049A0A140TA62 436 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 MRASO14807 208 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 KRT34O76011 436 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 OR7A10O76100 309 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 IGHG1P01857 330 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 FAM157BP0CG42 384 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 LSP1P33241 339 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 AQP2P41181 271 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 RPS23P62266 143 aaKnown RBP21.08■□□□□ 0.97
LIME1-206ENST00000487026 CR1LQ2VPA4 569 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 ELFN2Q5R3F8 820 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 SLC30A7Q8NEW0 376 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 MOSPD2Q8NHP6 518 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 C10orf82Q8WW14 230 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 SLC7A8Q9UHI5 535 aa21.08■□□□□ 0.97
LIME1-206ENST00000487026 A0A1W2PRG6 482 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 MCIDASD6RGH6 385 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 FARS2O95363 451 aaKnown RBP21.07■□□□□ 0.96
LIME1-206ENST00000487026 NAT2P11245 290 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 ARFIP2P53365 341 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 CCNIQ14094 377 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 HIST3H3Q16695 136 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 KRTAP24-1Q3LI83 254 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 CGB2Q6NT52 195 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 TMEM53Q6P2H8 277 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 SLC16A14Q7RTX9 510 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 TMEM239Q8WW34 195 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 SGTBQ96EQ0 304 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 MRPL13Q9BYD1 178 aaKnown RBP21.07■□□□□ 0.96
LIME1-206ENST00000487026 SAR1AQ9NR31 198 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 FGFR1OP2Q9NVK5 253 aa21.07■□□□□ 0.96
LIME1-206ENST00000487026 TRMUO75648 421 aaKnown RBP21.06■□□□□ 0.96
LIME1-206ENST00000487026 OR5F1O95221 314 aa21.06■□□□□ 0.96
LIME1-206ENST00000487026 CLPTM1O96005 669 aa21.06■□□□□ 0.96
LIME1-206ENST00000487026 TROVE2P10155 538 aaKnown RBP eCLIP21.06■□□□□ 0.96
LIME1-206ENST00000487026 HNF1AP20823 631 aa21.06■□□□□ 0.96
LIME1-206ENST00000487026 LAPTM4AQ15012 233 aa21.06■□□□□ 0.96
LIME1-206ENST00000487026 LRRC18Q8N456 261 aa21.06■□□□□ 0.96
LIME1-206ENST00000487026 LINC01356Q8N9X3 169 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms