RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 SLC22A6Q4U2R8 563 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 PDZD11Q5EBL8 140 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 OGFRL1Q5TC84 451 aaPredicted RBP4.93□□□□□ -1.62
SF1-217ENST00000486960 ANKRD34AQ69YU3 496 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 DNM1P34Q6PK57 102 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 KYAT3Q6YP21 454 aaKnown RBP4.93□□□□□ -1.62
SF1-217ENST00000486960 SPNS3Q6ZMD2 512 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 ZNF517Q6ZMY9 492 aaPredicted RBP4.93□□□□□ -1.62
SF1-217ENST00000486960 C20orf204Q6ZNR8 217 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 AHSA2Q719I0 299 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 COX15Q7KZN9 410 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 LYG2Q86SG7 212 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 ZNF761Q86XN6 746 aaPredicted RBP4.93□□□□□ -1.62
SF1-217ENST00000486960 SYT12Q8IV01 421 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 LACC1Q8IV20 430 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 RCOR2Q8IZ40 523 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 PUSL1Q8N0Z8 303 aaKnown RBP4.93□□□□□ -1.62
SF1-217ENST00000486960 MTURNQ8N3F0 131 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 FGFRL1Q8N441 504 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 ZNF808Q8N4W9 903 aaPredicted RBP4.93□□□□□ -1.62
SF1-217ENST00000486960 ZNF561Q8N587 486 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 CLDN19Q8N6F1 224 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 ATP6V1C2Q8NEY4 427 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 GJC3Q8NFK1 279 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 OR11L1Q8NGX0 322 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 OR52E5Q8NH55 327 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 OR5AK3PQ8NH89 298 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 TMEM37Q8WXS4 190 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 NR4A3Q92570 626 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 GCDHQ92947 438 aaPredicted RBP4.93□□□□□ -1.62
SF1-217ENST00000486960 ISOC2Q96AB3 205 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 RNF183Q96D59 192 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 WDYHV1Q96HA8 205 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 CXorf58Q96LI9 332 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 ZNF285Q96NJ3 590 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 ZNF385AQ96PM9 386 aaKnown RBP4.93□□□□□ -1.62
SF1-217ENST00000486960 MBOAT4Q96T53 435 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 MICU1Q9BPX6 476 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 SLC35A5Q9BS91 424 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 PRRG4Q9BZD6 226 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 UBXN6Q9BZV1 441 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 ZDHHC4Q9NPG8 344 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 PRSS16Q9NQE7 514 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 DLL4Q9NR61 685 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 RGS18Q9NS28 235 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 GIN1Q9NXP7 522 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 SMPXQ9UHP9 88 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 CDC42EP3Q9UKI2 254 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 DIMT1Q9UNQ2 313 aaKnown RBP4.93□□□□□ -1.62
SF1-217ENST00000486960 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
SF1-217ENST00000486960 MYO18AQ92614 2054 aaKnown RBP4.93□□□□□ -1.62
SF1-217ENST00000486960 ZNF106Q9H2Y7 1883 aaKnown RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 ARID1BQ8NFD5 2236 aaPredicted RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 NPIPA5A0A0B4J1W7 369 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 IGKV6-21A0A0C4DH24 114 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 A0A1W2PPK0 400 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 TCRBV7S3A2A0A539 114 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 CCDC182A6NF36 153 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 PRMT5O14744 637 aaPredicted RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 CASKO14936 926 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 SURF4O15260 269 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 TM9SF1O15321 606 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 SGCEO43556 437 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 RAMP3O60896 148 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 ATP6AP2O75787 350 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 ESRRBO95718 433 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 GLUD1P00367 558 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 IFNA21P01568 189 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 IFNW1P05000 195 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 EDN1P05305 212 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 LCKP06239 509 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 CDK1P06493 297 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 RNH1P13489 461 aaKnown RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 FSTP19883 344 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 DCKP27707 260 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 PRDX3P30048 256 aaKnown RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 GPR1P46091 355 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 DNASE1L1P49184 302 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 HOXA1P49639 335 aaPredicted RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 PSPHP78330 225 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 RPL19P84098 196 aaKnown RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 ZXDBP98169 803 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 TFAMQ00059 246 aaKnown RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 CHRNEQ04844 493 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 SLC18A2Q05940 514 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 RAB31Q13636 194 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 EXOSC7Q15024 291 aaKnown RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 EIF4HQ15056 248 aaKnown RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 HAGHQ16775 308 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 PLEKHN1Q494U1 663 aaPredicted RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 ACER2Q5QJU3 275 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 ZNF776Q68DI1 518 aaPredicted RBP4.92□□□□□ -1.62
SF1-217ENST00000486960 EFCAB12Q6NXP0 572 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 EMBQ6PCB8 327 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 TMPRSS11FQ6ZWK6 438 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 LINGO2Q7L985 606 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 S100A7AQ86SG5 101 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 TMPRSS11BQ86T26 416 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 STPG2Q8N412 459 aa4.92□□□□□ -1.62
SF1-217ENST00000486960 LINC01465Q8N7H1 131 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms