RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 OR2J3O76001 311 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 MGMTP16455 207 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 RCC1P18754 421 aaPredicted RBP3.06□□□□□ -1.92
SMC4-218ENST00000486711 AK4P27144 223 aaPredicted RBP3.06□□□□□ -1.92
SMC4-218ENST00000486711 NAA10P41227 235 aaPredicted RBP3.06□□□□□ -1.92
SMC4-218ENST00000486711 SYKP43405 635 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 SSR4P51571 173 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 PRRX1P54821 245 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 CCNA1P78396 465 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 SGCAQ16586 387 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 SPANXN2Q5MJ10 180 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 LRRC66Q68CR7 880 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 SASS6Q6UVJ0 657 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 ASCL5Q7RTU5 278 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 ZNF429Q86V71 674 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 OR1S2Q8NGQ3 325 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 ELMO1Q92556 727 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 KIFAP3Q92845 792 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 FAM210BQ96KR6 192 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 CHP1Q99653 195 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 CTPS2Q9NRF8 586 aa3.06□□□□□ -1.92
SMC4-218ENST00000486711 LSM7Q9UK45 103 aaKnown RBP3.06□□□□□ -1.92
SMC4-218ENST00000486711 COL16A1Q07092 1604 aaPredicted RBP3.05□□□□□ -1.92
SMC4-218ENST00000486711 NSD2O96028 1365 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 TRBV11-1A0A0K0K1C0 115 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 A0A1B0GVI7 797 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 PRSS37A4D1T9 235 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 SMCO2A6NFE2 343 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 LAD1O00515 517 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 RAB29O14966 203 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 DFNA5O60443 496 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 CLIC3O95833 236 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 SLC25A27O95847 323 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 ANXA5P08758 320 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 CNR1P21554 472 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 SERPINB5P36952 375 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 NSG1P42857 185 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 RFX3P48380 749 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 NMUP48645 174 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 TMED10P49755 219 aaKnown RBP3.05□□□□□ -1.92
SMC4-218ENST00000486711 FGF8P55075 233 aaPredicted RBP3.05□□□□□ -1.92
SMC4-218ENST00000486711 C21orf59P57076 290 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 KRTAP10-1P60331 282 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 ACTA2P62736 377 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 ACTG2P63267 376 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 ACTC1P68032 377 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 ACTA1P68133 377 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 CLINT1Q14677 625 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 PSG5Q15238 335 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 ZNF658BQ4V348 819 aaPredicted RBP3.05□□□□□ -1.92
SMC4-218ENST00000486711 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 C9orf135Q5VTT2 229 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 CYB5R2Q6BCY4 276 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 ANKRD26P1Q6NSI1 321 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 ZNF621Q6ZSS3 439 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 TMEM179Q6ZVK1 233 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 GTPBP8Q8N3Z3 284 aaPredicted RBP3.05□□□□□ -1.92
SMC4-218ENST00000486711 MREGQ8N565 214 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 SLC7A13Q8TCU3 470 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 TMEM54Q969K7 222 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 DNAJC19Q96DA6 116 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 PIK3IP1Q96FE7 263 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 AURKBQ96GD4 344 aaPredicted RBP3.05□□□□□ -1.92
SMC4-218ENST00000486711 P2RX4Q99571 388 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 HDHD3Q9BSH5 251 aaPredicted RBP3.05□□□□□ -1.92
SMC4-218ENST00000486711 ANP32EQ9BTT0 268 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 C20orf24Q9BUV8 137 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 GABARAPL3Q9BY60 117 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 ZNF160Q9HCG1 818 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 UXTQ9UBK9 157 aaPredicted RBP3.05□□□□□ -1.92
SMC4-218ENST00000486711 GOLT1BQ9Y3E0 138 aa3.05□□□□□ -1.92
SMC4-218ENST00000486711 CNTNAP1P78357 1384 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 NINLQ9Y2I6 1382 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 TRBV6-6A0A0A6YYG2 114 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 TRAV39A0A0B4J263 110 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 IGKV1D-13A0A0B4J2D9 117 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 ZNF726A6NNF4 738 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 CDH16O75309 829 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 CA11O75493 328 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 H6PDO95479 791 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 PLEKP08567 350 aaPredicted RBP3.04□□□□□ -1.92
SMC4-218ENST00000486711 SMIM10L1P0DMW3 83 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 IGHV3-43DP0DP04 118 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 IGKV1-13P0DP09 117 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 ADRB3P13945 408 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 OTX1P32242 354 aaPredicted RBP3.04□□□□□ -1.92
SMC4-218ENST00000486711 RPS21P63220 83 aaKnown RBP3.04□□□□□ -1.92
SMC4-218ENST00000486711 ADARB1P78563 741 aaKnown RBP3.04□□□□□ -1.92
SMC4-218ENST00000486711 REG3AQ06141 175 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 TWF1Q12792 350 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 GUCA2BQ16661 112 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 CERS6Q6ZMG9 384 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 Q6ZVH6 145 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 ARIH2OSQ8N7S6 290 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 ACMSDQ8TDX5 336 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 SMIM10Q96HG1 83 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 TSSK3Q96PN8 268 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 SLC29A1Q99808 456 aa3.04□□□□□ -1.92
SMC4-218ENST00000486711 RPF2Q9H7B2 306 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms