RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TLE3Q04726 772 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 MADCAM1Q13477 382 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 OPN5Q6U736 354 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 IL20RBQ6UXL0 311 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 OR5AK2Q8NH90 309 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 ASB10Q8WXI3 467 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 HSD17B8Q92506 261 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 RGP1Q92546 391 aaPredicted RBP18.3■□□□□ 0.52
HPS3-206ENST00000486530 MAP6Q96JE9 813 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 NOX4Q9NPH5 578 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 TEKT2Q9UIF3 430 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 KCNG2Q9UJ96 466 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 NPIPA1Q9UND3 350 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 CHCHD2Q9Y6H1 151 aaPredicted RBP18.3■□□□□ 0.52
HPS3-206ENST00000486530 EPXP11678 715 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 HLA-DOBP13765 273 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 MAPK3P27361 379 aaPredicted RBP18.29■□□□□ 0.52
HPS3-206ENST00000486530 NUBP1P53384 320 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 CEP78Q5JTW2 689 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 C3orf33Q6P1S2 294 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 TMEM81Q6P7N7 255 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 CELF2-AS1Q8N7Q2 184 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 FADS6Q8N9I5 356 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 C19orf18Q8NEA5 215 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 POC1BQ8TC44 478 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 DERL3Q96Q80 235 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 FANCFQ9NPI8 374 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 B3GALT5Q9Y2C3 310 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 CENPBD1B2RD01 187 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 SHISA8B8ZZ34 492 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 H3BML4 177 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 ZNF593O00488 134 aaPredicted RBP18.29■□□□□ 0.52
HPS3-206ENST00000486530 PDCD5O14737 125 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 IGHEP01854 428 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 EIF4EP06730 217 aaKnown RBP18.29■□□□□ 0.52
HPS3-206ENST00000486530 CELA2AP08217 269 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 CD63P08962 238 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 SRMP19623 302 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 GLO1Q04760 184 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 DCAF12Q5T6F0 453 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 DNM1P34Q6PK57 102 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 OR4K17Q8NGC6 315 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 NSMAFQ92636 917 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 C5orf34Q96MH7 638 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 FRMD6Q96NE9 622 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 OR8B4Q96RC9 309 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 COL25A1Q9BXS0 654 aaPredicted RBP18.29■□□□□ 0.52
HPS3-206ENST00000486530 TSPAN10Q9H1Z9 355 aaPredicted RBP18.29■□□□□ 0.52
HPS3-206ENST00000486530 PTGES2Q9H7Z7 377 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 B3GAT2Q9NPZ5 323 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 FRRS1LQ9P0K9 344 aa18.29■□□□□ 0.52
HPS3-206ENST00000486530 LINC00854A0A1B0GVQ3 168 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 A0A1W2PNV4 684 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 A0A1W2PQ72 361 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 ZNF432O94892 652 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 PSKH1P11801 424 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 ATF1P18846 271 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 RPS27P42677 84 aaKnown RBP18.28■□□□□ 0.52
HPS3-206ENST00000486530 Q499Y3 187 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 SLC18B1Q6NT16 456 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 SPATC1Q76KD6 591 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 NAXDQ8IW45 347 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 DND1Q8IYX4 353 aaKnown RBP18.28■□□□□ 0.52
HPS3-206ENST00000486530 KDM8Q8N371 416 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 IL17RDQ8NFM7 739 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 OR4M1Q8NGD0 313 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 OR2G2Q8NGZ5 317 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 C11orf54Q9H0W9 315 aaPredicted RBP18.28■□□□□ 0.52
HPS3-206ENST00000486530 MRPL22Q9NWU5 206 aaKnown RBP18.28■□□□□ 0.52
HPS3-206ENST00000486530 FBXL2Q9UKC9 423 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 ALPK2Q86TB3 2170 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 EML6Q6ZMW3 1958 aa18.28■□□□□ 0.52
HPS3-206ENST00000486530 ACOD1A6NK06 481 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 TMEM212A6NML5 194 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 PIN1P1O15428 100 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 EFNA2O43921 213 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 TMEM127O75204 238 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 PAHP00439 452 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 IFNGR1P15260 489 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 HSF1Q00613 529 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 POU3F1Q03052 451 aaPredicted RBP18.27■□□□□ 0.52
HPS3-206ENST00000486530 RASGEF1BQ0VAM2 473 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 SLC35D2Q76EJ3 337 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 NDUFAF7Q7L592 441 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 WDSUB1Q8N9V3 476 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 SUMF1Q8NBK3 374 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 ADPRHL1Q8NDY3 354 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 OR11G2Q8NGC1 345 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 CHAC2Q8WUX2 184 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 HPS1Q92902 700 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 NEDD4LQ96PU5 975 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 SMAD5Q99717 465 aaKnown RBP18.27■□□□□ 0.52
HPS3-206ENST00000486530 COMMD4Q9H0A8 199 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 LOXL2Q9Y4K0 774 aa18.27■□□□□ 0.52
HPS3-206ENST00000486530 NSG1A0A0A6YYJ2 146 aa18.26■□□□□ 0.51
HPS3-206ENST00000486530 TRBV5-5A0A0J9YX44 114 aa18.26■□□□□ 0.51
HPS3-206ENST00000486530 SPARCP09486 303 aa18.26■□□□□ 0.51
HPS3-206ENST00000486530 ADH6P28332 368 aa18.26■□□□□ 0.51
HPS3-206ENST00000486530 EIF1P41567 113 aaKnown RBP18.26■□□□□ 0.51
HPS3-206ENST00000486530 ADAM8P78325 824 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms