RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 GPR35Q9HC97 309 aa10.04□□□□□ -0.8
NUP50-216ENST00000486184 TUBAL3A6NHL2 446 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 RIIAD1A6NNX1 92 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 H7C1C5 153 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 EI24O14681 340 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 ARPC3O15145 178 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 AHCYL1O43865 530 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 CLDN1O95832 211 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 TXNDC12O95881 172 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 IFNGP01579 166 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 ITGA5P08648 1049 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 QDPRP09417 244 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 PSMB1P20618 241 aaKnown RBP10.03□□□□□ -0.8
NUP50-216ENST00000486184 COX5AP20674 150 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 GUCA1AP43080 201 aaPredicted RBP10.03□□□□□ -0.8
NUP50-216ENST00000486184 PCYT1AP49585 367 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 RAD23AP54725 363 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 LCN6P62502 163 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 ESRRGP62508 458 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 DAG1Q14118 895 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 MESTQ5EB52 335 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 THEM4Q5T1C6 240 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 SLC35F1Q5T1Q4 408 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 KDM4DQ6B0I6 523 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 LEG1Q6P5S2 330 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 DNM1P34Q6PK57 102 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 NHLRC1Q6VVB1 395 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 MEX3BQ6ZN04 569 aaKnown RBP10.03□□□□□ -0.8
NUP50-216ENST00000486184 ZBTB49Q6ZSB9 765 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 FAM122BQ7Z309 247 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 PARP8Q8N3A8 854 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 CBR4Q8N4T8 237 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 ZNF433Q8N7K0 673 aaPredicted RBP10.03□□□□□ -0.8
NUP50-216ENST00000486184 C1orf162Q8NEQ5 155 aaPredicted RBP10.03□□□□□ -0.8
NUP50-216ENST00000486184 OR8D4Q8NGM9 314 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 HDAC2Q92769 488 aaKnown RBP10.03□□□□□ -0.8
NUP50-216ENST00000486184 PLEKHA8Q96JA3 519 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 MED18Q9BUE0 208 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 TMUB1Q9BVT8 246 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 ACTR6Q9GZN1 396 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 REV1Q9UBZ9 1251 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 KLHL21Q9UJP4 597 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 LRRK2Q5S007 2527 aa10.03□□□□□ -0.8
NUP50-216ENST00000486184 FASNP49327 2511 aaKnown RBP10.02□□□□□ -0.8
NUP50-216ENST00000486184 DOPEY2Q9Y3R5 2298 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 PRSS37A4D1T9 235 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 ZNF99A8MXY4 864 aaPredicted RBP10.02□□□□□ -0.81
NUP50-216ENST00000486184 RPL36A-HNRNPH2H7BZ11 118 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 C19orf84I3L1E1 186 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 BHLHE40O14503 412 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 CASKO14936 926 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 DHHO43323 396 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 MITFO75030 526 aaPredicted RBP10.02□□□□□ -0.81
NUP50-216ENST00000486184 FARS2O95363 451 aaKnown RBP10.02□□□□□ -0.81
NUP50-216ENST00000486184 IGFBP1P08833 259 aaPredicted RBP10.02□□□□□ -0.81
NUP50-216ENST00000486184 COX6B1P14854 86 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 HIST1H1CP16403 213 aaKnown RBP10.02□□□□□ -0.81
NUP50-216ENST00000486184 ZNF3P17036 446 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 GRK5P34947 590 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 KIR2DL3P43628 341 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 ALDH3A2P51648 485 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 CRISP1P54107 249 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 UBE2NP61088 152 aaKnown RBP10.02□□□□□ -0.81
NUP50-216ENST00000486184 ARF1P84077 181 aaKnown RBP10.02□□□□□ -0.81
NUP50-216ENST00000486184 PPP2R2BQ00005 443 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 RUNX1T1Q06455 604 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.02□□□□□ -0.81
NUP50-216ENST00000486184 SNTB1Q13884 538 aaKnown RBP10.02□□□□□ -0.81
NUP50-216ENST00000486184 GINS1Q14691 196 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 TSC22D1Q15714 1073 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 PGGHGQ32M88 737 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 PHYHD1Q5SRE7 291 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 ANKRD34AQ69YU3 496 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 ALKBH2Q6NS38 261 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 ANKRD16Q6P6B7 361 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 ZNF813Q6ZN06 617 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 WDFY1Q8IWB7 410 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 LNX2Q8N448 690 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 C17orf78Q8N4C9 275 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 SDR9C7Q8NEX9 313 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 OR52E2Q8NGJ4 325 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 OR1K1Q8NGR3 316 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 OR4K13Q8NH42 304 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 NSMAFQ92636 917 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 MCHR2Q969V1 340 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 S100PBPQ96BU1 408 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 MUCL1Q96DR8 90 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 SLC38A2Q96QD8 506 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 FOXB1Q99853 325 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 MRPL13Q9BYD1 178 aaKnown RBP10.02□□□□□ -0.81
NUP50-216ENST00000486184 OR10A4Q9H209 315 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 VCXQ9H320 206 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 RIBC2Q9H4K1 309 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 RERGLQ9H628 205 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 ZNF226Q9NYT6 803 aa10.02□□□□□ -0.81
NUP50-216ENST00000486184 PLEKHB1Q9UF11 243 aaPredicted RBP10.02□□□□□ -0.81
NUP50-216ENST00000486184 A0A1W2PPL8 197 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 SLC22A23A1A5C7 686 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 SH3D21A4FU49 640 aa10.01□□□□□ -0.81
NUP50-216ENST00000486184 SLC2A10O95528 541 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms